Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PACSIN1Q9BY11 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 RNU4-92P-201ENST00000363783 136 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 MIR551A-201ENST00000385042 96 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 PEX12P1-201ENST00000400284 1048 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 MTCO1P56-201ENST00000401674 224 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 DNAJC19P6-201ENST00000401853 280 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 RPS3AP2-201ENST00000407190 754 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL356320.2-201ENST00000417263 507 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 MTND2P18-201ENST00000419962 1030 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC246680.2-201ENST00000422106 389 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 USP9YP11-201ENST00000427537 717 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 FMO7P-201ENST00000436045 768 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC016772.1-201ENST00000444170 1261 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 PRDX3P4-201ENST00000470828 747 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC016559.2-201ENST00000510759 359 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 Y_RNA.688-201ENST00000516565 95 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AP004607.2-201ENST00000533949 322 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 NANOGNBP2-201ENST00000544753 553 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL359219.2-201ENST00000555184 348 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 PRPF19P1-201ENST00000584766 898 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC010487.1-201ENST00000594408 1172 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC027243.2-201ENST00000602530 724 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 MIR7109-201ENST00000613748 65 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 FRG1HP-204ENST00000617940 757 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PACSIN1Q9BY11 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AC006484.1-201ENST00000435086 1884 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL450345.1-202ENST00000605741 3881 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 MTND4P10-201ENST00000446199 1363 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AC017079.1-201ENST00000333650 415 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 RNU6-1214P-201ENST00000363650 109 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 Y_RNA.169-201ENST00000363745 96 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL008987.1-201ENST00000415528 237 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AC009518.2-201ENST00000418056 731 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AC093155.2-201ENST00000420734 937 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 HIGD1AP12-201ENST00000427832 281 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 YWHAZP2-201ENST00000440317 728 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 PTENP1-201ENST00000447117 1215 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AL050341.1-201ENST00000447743 313 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 PRPF38AP1-201ENST00000451976 933 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 OR2AF1P-201ENST00000454899 889 ntBASIC5.73□□□□□ -1.49
PACSIN1Q9BY11 USP9YP25-201ENST00000457708 443 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms