Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC005899.7-201ENST00000618199 588 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 AL731556.1-201ENST00000394628 3711 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 UGT2B26P-201ENST00000508672 1613 ntBASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD1Q96NR3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 Y_RNA.303-201ENST00000364998 94 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 Y_RNA.390-201ENST00000383932 102 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RN7SKP86-201ENST00000410454 332 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 ZNF863P-201ENST00000426746 417 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RPL7P48-201ENST00000461513 746 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AL603882.1-201ENST00000463059 681 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RPL30P9-201ENST00000465586 330 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RN7SL369P-201ENST00000477138 299 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 OR9A1P-202ENST00000484361 945 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 FCF1P3-201ENST00000496394 590 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC112484.3-201ENST00000505910 329 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RNU6-528P-201ENST00000516926 100 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC008083.2-201ENST00000546707 476 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 PSMB7P1-201ENST00000556349 514 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 BGLT3-201ENST00000564523 994 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 PCMTD1P2-201ENST00000565017 355 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC011497.2-201ENST00000600255 639 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC004067.1-201ENST00000608733 700 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AL359091.2-201ENST00000609303 556 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AL356321.1-201ENST00000621360 228 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 AC012254.5-201ENST00000623573 478 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 OR5H6-203ENST00000642105 978 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 MTCO1P23-201ENST00000415223 1526 ntBASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD1Q96NR3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
PTCHD1Q96NR3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
PTCHD1Q96NR3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.96□□□□□ -1.45
PTCHD1Q96NR3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.96□□□□□ -1.45
PTCHD1Q96NR3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 OR9G4-201ENST00000302957 984 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RNU5F-7P-201ENST00000363696 115 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP232-201ENST00000364144 119 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 RNA5SP478-201ENST00000364657 115 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 AL034374.1-201ENST00000406329 351 ntBASIC5.96□□□□□ -1.46
PTCHD1Q96NR3 MIR1303-201ENST00000408625 86 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 317.2 ms