Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC108463.1-201ENST00000450258 347 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC010326.1-201ENST00000462726 602 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC007686.1-201ENST00000488511 463 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 OR5M2P-201ENST00000529003 936 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC137768.1-201ENST00000549998 553 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC073091.2-201ENST00000603205 907 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 MAPK10-263ENST00000641052 4307 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 RN7SKP267-201ENST00000410381 285 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 RNU2-50P-201ENST00000410494 143 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 NPM1P40-201ENST00000412758 733 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 ATG4AP1-201ENST00000416893 538 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC019050.1-201ENST00000418508 492 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC140479.3-201ENST00000418944 1126 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC013470.3-201ENST00000420252 1194 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC092447.2-201ENST00000435487 669 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 MRPL48P1-201ENST00000445390 636 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 RPL36AP41-201ENST00000493820 306 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC025164.1-201ENST00000496249 478 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AP006289.1-201ENST00000538089 277 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 RN7SL652P-201ENST00000577769 300 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AL713998.2-201ENST00000604538 1198 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 AC011815.3-201ENST00000624194 473 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 RLIMP2-201ENST00000427891 1563 ntBASIC4.74□□□□□ -1.65
ECHDC3Q96DC8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AL031119.1-201ENST00000404707 1879 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 SNORA70F-201ENST00000384142 135 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AL049697.2-201ENST00000403708 294 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AP000580.1-201ENST00000404439 358 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 RPL37P18-201ENST00000411602 243 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 FABP7P2-201ENST00000429946 379 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC004938.1-201ENST00000438468 308 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AL138878.2-201ENST00000440581 1241 ntBASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.73□□□□□ -1.65
ECHDC3Q96DC8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms