Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 CYCSP40-201ENST00000575927 294 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AC116651.1-201ENST00000609724 556 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AC006453.5-201ENST00000636451 619 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AC005005.4-201ENST00000623789 16698 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AC245100.2-201ENST00000454544 1679 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 DDX18P5-201ENST00000534547 1306 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 PROS2P-201ENST00000474651 1951 ntBASIC4.44□□□□□ -1.7
C9orf40Q8IXQ3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AL442639.1-201ENST00000625030 1899 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC008079.2-201ENST00000623543 20396 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 OR5T3-201ENST00000303059 1023 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 RNU4-44P-201ENST00000363050 141 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AL672167.2-201ENST00000377164 879 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 BX510359.2-201ENST00000417920 305 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 OR5M12P-201ENST00000423388 929 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 USP9YP9-201ENST00000429406 715 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 MTCO1P57-201ENST00000432182 261 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC005154.2-201ENST00000438110 379 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 RPL36AP15-201ENST00000444514 266 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 RAB28P3-201ENST00000448325 597 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC239798.3-201ENST00000454459 408 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 MTND6P32-201ENST00000457611 483 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AK4P6-201ENST00000505168 528 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 OR7E10P-201ENST00000526420 991 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC012467.1-201ENST00000607740 256 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AL159169.2-201ENST00000610061 1269 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC015914.2-201ENST00000618167 288 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 AC073429.2-201ENST00000569694 1444 ntBASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.43□□□□□ -1.7
C9orf40Q8IXQ3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 MT-RNR1-201ENST00000389680 954 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 RNU1-82P-201ENST00000390851 165 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 U3.35-201ENST00000408405 208 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 AL445213.1-201ENST00000412589 747 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 TMBIM7P-201ENST00000418074 855 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 VN1R37P-201ENST00000419096 748 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 FABP7P1-201ENST00000424004 391 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 NPM1P26-201ENST00000426339 738 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 TRIM60P13-201ENST00000432350 1283 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 CYCSP11-201ENST00000436426 315 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 AC114878.1-201ENST00000441166 358 ntBASIC4.42□□□□□ -1.7
C9orf40Q8IXQ3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms