Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP35-201ENST00000391257 129 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC090114.1-201ENST00000393266 448 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC099535.1-201ENST00000408928 371 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 HSPE1P1-201ENST00000421494 318 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 CYP4F34P-201ENST00000425951 481 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AF274573.1-201ENST00000430535 494 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 RPS3AP52-201ENST00000435639 297 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 SNRPEP7-201ENST00000438350 220 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 HMGB3P22-202ENST00000451823 572 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AL645937.3-201ENST00000453647 936 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 YWHAEP1-201ENST00000453697 763 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC066616.1-201ENST00000486795 413 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC107222.1-201ENST00000510899 637 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC009902.1-201ENST00000519351 183 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AP000889.2-201ENST00000532684 490 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC024614.1-201ENST00000577546 307 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 uc_338.15-201ENST00000615470 191 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AL121985.3-201ENST00000620690 523 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AL034408.1-201ENST00000637712 664 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 AC104118.1-201ENST00000607625 1589 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 SPATA31C2-201ENST00000324915 3777 ntBASIC7.62□□□□□ -1.19
SCUBE3Q8IX30 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC079178.2-201ENST00000439323 1624 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 RNU6-1026P-201ENST00000384465 108 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 SNORD3H-201ENST00000384486 214 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AL139100.1-201ENST00000408001 498 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 RNA5SP177-201ENST00000410122 107 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 VDAC1P2-201ENST00000423609 850 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 RBMY2QP-201ENST00000429799 1147 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC114755.4-201ENST00000439114 443 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 CYCSP44-201ENST00000448560 313 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 TMEM248P1-201ENST00000510579 951 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 MRPS5P3-201ENST00000515577 166 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 SUB1P1-201ENST00000524415 382 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC061975.3-201ENST00000583209 244 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AC005357.1-201ENST00000588399 301 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 RPSAP66-201ENST00000592196 606 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 APOOP1-201ENST00000604695 592 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 MIR6070-201ENST00000613967 103 ntBASIC7.61□□□□□ -1.19
SCUBE3Q8IX30 Six3os1_2.1-201ENST00000616963 217 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms