Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC087283.1-201ENST00000604029 1074 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC104307.1-201ENST00000616142 196 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AL121890.2-201ENST00000617644 465 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC091905.4-201ENST00000623432 202 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 PANDAR-201ENST00000629595 1506 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 SCN1A-220ENST00000641603 12506 ntBASIC4.66□□□□□ -1.66
CCDC71Q8IV32 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC71Q8IV32 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 THAP12P4-201ENST00000528321 2266 ntBASIC4.65□□□□□ -1.66
CCDC71Q8IV32 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC71Q8IV32 RNA5SP90-201ENST00000364801 99 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 CYB5AP4-201ENST00000396692 399 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 SEPT7P8-201ENST00000413308 775 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 RPL26P29-201ENST00000415623 438 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 NPM1P26-201ENST00000426339 738 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 TRY2P-201ENST00000448860 689 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 RHEBP2-201ENST00000450289 600 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC090686.1-201ENST00000481577 749 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 RPL37AP8-201ENST00000494116 276 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 RNA5SP249-201ENST00000516127 99 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 PCNPP1-201ENST00000552501 511 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AL049830.4-201ENST00000555149 351 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AL731537.2-201ENST00000561565 951 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 ELOCP28-201ENST00000590044 317 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 RNF138P2-201ENST00000603490 592 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AL008729.2-201ENST00000606393 473 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC007620.3-201ENST00000608131 497 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
CCDC71Q8IV32 AL034370.1-201ENST00000397254 1590 ntBASIC4.65□□□□□ -1.67
CCDC71Q8IV32 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 U3.3-201ENST00000362986 216 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 RNU6-152P-201ENST00000384037 107 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 EIF4A1P1-201ENST00000420241 934 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 EI24P4-201ENST00000423683 1078 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC106901.1-201ENST00000425086 698 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 COX6CP13-201ENST00000428703 226 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 CEACAMP9-201ENST00000442990 513 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 GYG1P1-201ENST00000460864 698 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 RPS27AP18-201ENST00000515536 459 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC022882.1-201ENST00000532142 501 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AL512310.9-201ENST00000553311 948 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC012414.2-201ENST00000559474 187 ntBASIC4.64□□□□□ -1.67
CCDC71Q8IV32 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71Q8IV32 CYCSP40-201ENST00000575927 294 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms