Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 RPL7L1P1-201ENST00000448259 785 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AURKAPS2-201ENST00000454983 333 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 RN7SL481P-201ENST00000477764 299 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC011005.3-201ENST00000491624 395 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 RNA5SP249-201ENST00000516127 99 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC134698.5-201ENST00000519444 336 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC012339.2-201ENST00000523996 453 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AP006289.1-201ENST00000538089 277 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 GSTP1P1-201ENST00000548078 319 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC011270.1-201ENST00000558606 583 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC079075.1-201ENST00000559543 878 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 AL133406.3-201ENST00000606817 541 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAB43Q86YS6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAB43Q86YS6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
RAB43Q86YS6 SALL4P2-201ENST00000423288 2910 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 AC006971.1-201ENST00000407916 4486 ntBASIC4.62□□□□□ -1.67
RAB43Q86YS6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAB43Q86YS6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 MIR141-201ENST00000384975 95 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC114755.2-201ENST00000413520 361 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 BX510359.2-201ENST00000417920 305 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 E2F6P2-201ENST00000420708 748 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC244033.1-201ENST00000426826 870 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 DNAJC19P7-201ENST00000428811 344 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC011753.3-201ENST00000443436 406 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB43Q86YS6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC009220.1-201ENST00000451614 275 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC017007.3-201ENST00000479865 435 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC108043.1-201ENST00000512696 574 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 SNORA26.10-201ENST00000516427 141 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AP000859.1-201ENST00000525536 307 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 OR5AN2P-201ENST00000534535 896 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AL512310.9-201ENST00000553311 948 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AL451049.1-201ENST00000608672 497 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 AP000346.3-201ENST00000622821 210 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 MIR7641-1-201ENST00000627518 61 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 AL133268.1-201ENST00000405676 1401 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.61□□□□□ -1.67
RAB43Q86YS6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RAB43Q86YS6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB43Q86YS6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB43Q86YS6 CDC27P2-201ENST00000425026 1922 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB43Q86YS6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB43Q86YS6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB43Q86YS6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB43Q86YS6 AC079741.1-201ENST00000321498 212 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB43Q86YS6 BMS1P3-201ENST00000372011 932 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAB43Q86YS6 NRBF2P3-201ENST00000432731 865 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 TXNP5-201ENST00000441043 315 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB43Q86YS6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB43Q86YS6 HMGB1P4-201ENST00000455362 567 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 AC005412.2-201ENST00000492004 341 ntBASIC4.6□□□□□ -1.67
RAB43Q86YS6 RPL23AP72-201ENST00000492447 435 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms