Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 HMGB2P1-201ENST00000591146 634 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC130352.1-201ENST00000602979 661 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 AC011815.3-201ENST00000624194 473 ntBASIC4.25□□□□□ -1.73
CCDC58Q4VC31 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC58Q4VC31 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 XKRY2-202ENST00000623874 1581 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 XKRY-202ENST00000624960 1581 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 TMSB4XP4-201ENST00000323496 618 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AL357515.1-201ENST00000402967 542 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 VN1R3-201ENST00000418822 919 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AL391219.1-201ENST00000422570 483 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 RPL7P28-201ENST00000437739 740 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 SPRYD7P1-201ENST00000443861 570 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 RPL7P33-201ENST00000444159 742 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 NDUFA5P8-201ENST00000449019 346 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 HSPE1P22-201ENST00000456856 327 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 SEPT14P1-201ENST00000458703 648 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 RNU7-157P-201ENST00000459600 66 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC104849.1-201ENST00000462623 405 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC116562.1-201ENST00000485355 781 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 HMGN2P25-201ENST00000486956 268 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 RNA5SP43-201ENST00000516559 110 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AL121932.1-201ENST00000605542 214 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC090948.2-201ENST00000607363 564 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AC126175.1-201ENST00000617041 758 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 CASC19-264ENST00000641912 1184 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 AP001002.1-201ENST00000625148 1513 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 MAPK10-253ENST00000641010 4072 ntBASIC4.24□□□□□ -1.73
CCDC58Q4VC31 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
CCDC58Q4VC31 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 RNU1-43P-201ENST00000365052 165 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 MIR143-201ENST00000385300 106 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 CXADRP1-201ENST00000398098 1095 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 ARL4AP5-201ENST00000404372 599 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 DUTP5-201ENST00000406790 469 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 CDY17P-201ENST00000414121 1282 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 TBCAP2-201ENST00000416175 326 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 DPY19L1P2-201ENST00000426647 915 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 RPS17P8-201ENST00000434525 335 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 RPS20P1-201ENST00000434853 354 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 AL133477.1-201ENST00000457472 514 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 PGAM1P13-201ENST00000507497 754 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 BX510359.5-201ENST00000515651 304 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 FKBP1BP1-201ENST00000553366 325 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 AC011447.4-201ENST00000587562 111 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 CXADRP3-202ENST00000617265 1100 ntBASIC4.23□□□□□ -1.73
CCDC58Q4VC31 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC58Q4VC31 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms