Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MRPL57P3-201ENST00000619218 176 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AC010338.1-201ENST00000621823 717 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC068880.5-201ENST00000624331 290 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AC095038.1-201ENST00000429248 1591 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 PARP4P1-201ENST00000435945 2337 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.46□□□□□ -1.37
PCDH1Q08174 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH1Q08174 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
PCDH1Q08174 AC068870.3-201ENST00000625077 2536 ntBASIC6.46□□□□□ -1.37
PCDH1Q08174 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH1Q08174 AC007114.2-201ENST00000576014 4281 ntBASIC6.46□□□□□ -1.37
PCDH1Q08174 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PCDH1Q08174 MTND5P23-201ENST00000430812 1655 ntBASIC6.46□□□□□ -1.37
PCDH1Q08174 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
PCDH1Q08174 AC006026.1-201ENST00000444025 1803 ntBASIC6.46□□□□□ -1.37
PCDH1Q08174 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.46□□□□□ -1.37
PCDH1Q08174 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
PCDH1Q08174 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH1Q08174 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDH1Q08174 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH1Q08174 Y_RNA.25-201ENST00000362528 102 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
PCDH1Q08174 RN7SKP296-201ENST00000411185 341 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 RPS20P15-201ENST00000412792 311 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 FCF1P2-201ENST00000415284 583 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH1Q08174 USP9YP27-201ENST00000418455 438 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC083875.1-201ENST00000419509 405 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC009303.1-201ENST00000426307 352 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC073335.1-201ENST00000427776 363 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH1Q08174 RPL7P56-201ENST00000429441 717 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC093019.1-201ENST00000443135 252 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 GAPDHP20-201ENST00000444107 1007 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH1Q08174 RPL26P28-201ENST00000451325 435 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 RPL26P30-201ENST00000453533 435 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC092757.1-201ENST00000467293 467 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 RN7SL216P-201ENST00000471607 298 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC098583.1-201ENST00000480875 255 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 RPS3AP14-201ENST00000483907 780 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 RPL15P21-201ENST00000495592 567 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC021678.1-201ENST00000505195 936 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 SNORA58-201ENST00000505219 137 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 HMGB1P29-201ENST00000505659 499 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH1Q08174 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH1Q08174 LRRC34P2-201ENST00000514850 553 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 RNU6-1153P-201ENST00000516760 105 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH1Q08174 SNRPCP6-201ENST00000528310 210 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC022878.1-201ENST00000530684 149 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH1Q08174 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.46□□□□□ -1.38
PCDH1Q08174 RN7SL131P-201ENST00000579043 256 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 MIR378H-201ENST00000579966 83 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC011921.2-201ENST00000589465 152 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.46□□□□□ -1.38
PCDH1Q08174 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC103792.1-201ENST00000603591 919 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC112187.2-201ENST00000604345 283 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PCDH1Q08174 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC103710.4-201ENST00000609301 899 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC023509.5-201ENST00000617434 807 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AL445264.1-201ENST00000621719 171 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC061999.1-201ENST00000624454 177 ntBASIC6.46□□□□□ -1.38
PCDH1Q08174 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.46□□□□□ -1.38
PCDH1Q08174 AC024614.3-201ENST00000637860 256 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms