Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.59□□□□□ -1.51
UBE3AQ05086 AL139022.2-201ENST00000606934 443 ntBASIC5.59□□□□□ -1.51
UBE3AQ05086 AL391834.1-201ENST00000609609 560 ntBASIC5.59□□□□□ -1.51
UBE3AQ05086 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.59□□□□□ -1.51
UBE3AQ05086 uc_338.7-201ENST00000621834 124 ntBASIC5.59□□□□□ -1.51
UBE3AQ05086 AC006840.1-201ENST00000623069 542 ntBASIC5.59□□□□□ -1.51
UBE3AQ05086 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
UBE3AQ05086 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
UBE3AQ05086 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBE3AQ05086 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
UBE3AQ05086 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBE3AQ05086 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
UBE3AQ05086 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
UBE3AQ05086 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
UBE3AQ05086 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
UBE3AQ05086 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
UBE3AQ05086 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
UBE3AQ05086 FABP12P1-201ENST00000401911 322 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 EI24P4-201ENST00000423683 1078 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 MTCO1P43-201ENST00000431831 488 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 MTCO1P52-201ENST00000433928 531 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC008072.1-201ENST00000434254 824 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 PRPF38AP2-201ENST00000438179 851 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 AC008379.1-201ENST00000463655 464 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 NAMPTP2-201ENST00000505629 1115 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC020937.1-201ENST00000519677 1013 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.58□□□□□ -1.52
UBE3AQ05086 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AC009117.1-201ENST00000563948 554 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3AQ05086 MIR4691-201ENST00000583764 85 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 EIF1P5-201ENST00000585002 234 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC133794.1-201ENST00000602731 914 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC009027.1-201ENST00000604510 479 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC018618.2-201ENST00000604770 446 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AC079610.2-201ENST00000604818 690 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 AP005229.2-201ENST00000609980 697 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 AL049777.1-201ENST00000622740 518 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 MIR7641-1-201ENST00000627518 61 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 AC000095.2-202ENST00000637415 154 ntBASIC5.58□□□□□ -1.52
UBE3AQ05086 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3AQ05086 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3AQ05086 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
UBE3AQ05086 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
UBE3AQ05086 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.57□□□□□ -1.52
UBE3AQ05086 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 SDAD1P1-202ENST00000524156 2051 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
UBE3AQ05086 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
UBE3AQ05086 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 RNA5SP455-201ENST00000365190 119 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.57□□□□□ -1.52
UBE3AQ05086 OR8V1P-201ENST00000395193 873 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3AQ05086 Z97832.1-201ENST00000402490 328 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 NPM1P40-201ENST00000412758 733 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.57□□□□□ -1.52
UBE3AQ05086 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.57□□□□□ -1.52
UBE3AQ05086 CHEK2P3-201ENST00000416118 248 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 MTCO3P4-201ENST00000419236 787 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.57□□□□□ -1.52
UBE3AQ05086 VTI1BP4-201ENST00000427516 527 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 RPS29P10-201ENST00000439197 166 ntBASIC5.57□□□□□ -1.52
UBE3AQ05086 AC097499.1-201ENST00000444277 208 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms