Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 RNU1-20P-201ENST00000363314 162 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 ATP5HP3-201ENST00000396994 486 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 Z97832.1-201ENST00000402490 328 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AL021331.1-201ENST00000402817 582 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 RNA5SP104-201ENST00000410989 118 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AL137845.2-201ENST00000444292 988 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC006967.1-201ENST00000467608 589 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC097484.1-201ENST00000471148 389 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 RN7SL101P-201ENST00000496350 279 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC072052.1-201ENST00000496556 306 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 PRELID3BP7-201ENST00000503606 469 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 COX6B1P5-201ENST00000509843 249 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 OR7E128P-201ENST00000532736 1024 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC007225.2-201ENST00000562529 256 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 TVP23CP2-201ENST00000571473 623 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC005377.1-201ENST00000605126 456 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 AL929601.4-201ENST00000613011 1341 ntBASIC3.69□□□□□ -1.82
HIST1H1AQ02539 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC068254.2-201ENST00000623938 3577 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 SNURFL-201ENST00000309296 343 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC008549.2-201ENST00000333482 706 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AL645733.1-201ENST00000402250 217 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AL603766.1-201ENST00000407763 664 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 MTCO1P51-201ENST00000427672 1060 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 SCAND3P1-201ENST00000439854 1060 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 RPL23AP2-201ENST00000471227 466 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 RN7SL319P-201ENST00000480656 221 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC116562.1-201ENST00000485355 781 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC025445.1-201ENST00000502728 300 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 OR51K1P-201ENST00000510214 950 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 RNA5SP154-201ENST00000516193 111 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 VTA1P2-201ENST00000520205 911 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC092490.3-201ENST00000545370 572 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC068446.3-201ENST00000555285 382 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC090948.2-201ENST00000607363 564 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC004808.2-201ENST00000627965 773 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 AL133412.1-201ENST00000380194 2992 ntBASIC3.68□□□□□ -1.82
HIST1H1AQ02539 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HIST1H1AQ02539 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 AL136164.3-201ENST00000624429 3978 ntBASIC3.67□□□□□ -1.82
HIST1H1AQ02539 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H1AQ02539 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms