Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RFPL4AP5-201ENST00000514977 504 ntBASIC3.13□□□□□ -1.91
RPL39P62891 RNU2-30P-201ENST00000516209 141 ntBASIC3.13□□□□□ -1.91
RPL39P62891 RN7SKP66-201ENST00000516681 231 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 OR5M7P-201ENST00000526140 972 ntBASIC3.13□□□□□ -1.91
RPL39P62891 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.13□□□□□ -1.91
RPL39P62891 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.13□□□□□ -1.91
RPL39P62891 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RPL39P62891 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.13□□□□□ -1.91
RPL39P62891 BNIP3P32-201ENST00000600015 554 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.13□□□□□ -1.91
RPL39P62891 BPIFA4P-203ENST00000603168 689 ntBASIC3.13□□□□□ -1.91
RPL39P62891 AL451049.1-201ENST00000608672 497 ntBASIC3.13□□□□□ -1.91
RPL39P62891 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.13□□□□□ -1.91
RPL39P62891 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.13□□□□□ -1.91
RPL39P62891 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RPL39P62891 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
RPL39P62891 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RPL39P62891 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RPL39P62891 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RPL39P62891 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 MIR1911-201ENST00000410783 80 ntBASIC3.12□□□□□ -1.91
RPL39P62891 RPS12P10-201ENST00000427031 377 ntBASIC3.12□□□□□ -1.91
RPL39P62891 FGF12-202ENST00000430714 603 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.12□□□□□ -1.91
RPL39P62891 AC012671.1-201ENST00000451912 203 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 RPS6P2-201ENST00000454208 705 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.12□□□□□ -1.91
RPL39P62891 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.12□□□□□ -1.91
RPL39P62891 PHBP17-201ENST00000528576 541 ntBASIC3.12□□□□□ -1.91
RPL39P62891 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.12□□□□□ -1.91
RPL39P62891 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.12□□□□□ -1.91
RPL39P62891 MIR3691-201ENST00000578066 90 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.12□□□□□ -1.91
RPL39P62891 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.12□□□□□ -1.91
RPL39P62891 AC006116.3-201ENST00000592968 361 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 AC015982.1-201ENST00000608113 465 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AL158196.1-201ENST00000616786 434 ntBASIC3.12□□□□□ -1.91
RPL39P62891 MIR6778-201ENST00000617912 73 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AF117829.2-201ENST00000619538 361 ntBASIC3.12□□□□□ -1.91
RPL39P62891 U3.53-201ENST00000628922 216 ntBASIC3.12□□□□□ -1.91
RPL39P62891 A2MP1-204ENST00000566278 4130 ntBASIC3.12□□□□□ -1.91
RPL39P62891 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 LINC00622-201ENST00000562811 1570 ntBASIC3.12□□□□□ -1.91
RPL39P62891 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.12□□□□□ -1.91
RPL39P62891 PABPC1P6-201ENST00000445594 1829 ntBASIC3.12□□□□□ -1.91
RPL39P62891 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.12□□□□□ -1.91
RPL39P62891 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPL39P62891 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RPL39P62891 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.11□□□□□ -1.91
RPL39P62891 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RPL39P62891 RNA5SP388-201ENST00000362584 119 ntBASIC3.11□□□□□ -1.91
RPL39P62891 RNU1-106P-201ENST00000384382 164 ntBASIC3.11□□□□□ -1.91
RPL39P62891 U3.25-201ENST00000391209 220 ntBASIC3.11□□□□□ -1.91
RPL39P62891 SNORA74C-2-201ENST00000411179 201 ntBASIC3.11□□□□□ -1.91
RPL39P62891 RPS20P14-201ENST00000412545 360 ntBASIC3.11□□□□□ -1.91
RPL39P62891 RSU1P3-201ENST00000412878 835 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.11□□□□□ -1.91
RPL39P62891 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.11□□□□□ -1.91
RPL39P62891 NPM1P25-201ENST00000429734 854 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 CYCSP11-201ENST00000436426 315 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 OR1H1P-201ENST00000448731 937 ntBASIC3.11□□□□□ -1.91
RPL39P62891 AL451050.1-201ENST00000450126 415 ntBASIC3.11□□□□□ -1.91
RPL39P62891 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.11□□□□□ -1.91
RPL39P62891 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPL39P62891 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.11□□□□□ -1.91
RPL39P62891 HNRNPKP5-201ENST00000515300 253 ntBASIC3.11□□□□□ -1.91
RPL39P62891 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms