Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 OR7E13P-201ENST00000526052 910 ntBASIC4.18□□□□□ -1.74
LMO4P61968 LRRC34P1-201ENST00000542742 915 ntBASIC4.18□□□□□ -1.74
LMO4P61968 CR383656.6-201ENST00000550518 394 ntBASIC4.18□□□□□ -1.74
LMO4P61968 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 AC084759.1-201ENST00000561168 290 ntBASIC4.18□□□□□ -1.74
LMO4P61968 MIR4675-201ENST00000577898 77 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC005412.1-201ENST00000580812 1049 ntBASIC4.18□□□□□ -1.74
LMO4P61968 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LMO4P61968 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LMO4P61968 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 MTCO2P22-201ENST00000603246 681 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC087283.1-201ENST00000604029 1074 ntBASIC4.18□□□□□ -1.74
LMO4P61968 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 AL162574.1-201ENST00000615702 950 ntBASIC4.18□□□□□ -1.74
LMO4P61968 LINC00216-201ENST00000623548 1126 ntBASIC4.18□□□□□ -1.74
LMO4P61968 AC006963.1-201ENST00000624003 1052 ntBASIC4.18□□□□□ -1.74
LMO4P61968 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.18□□□□□ -1.74
LMO4P61968 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LMO4P61968 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 SMG1P7-201ENST00000565246 2704 ntBASIC4.18□□□□□ -1.74
LMO4P61968 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.18□□□□□ -1.74
LMO4P61968 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
LMO4P61968 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LMO4P61968 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.18□□□□□ -1.74
LMO4P61968 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.17□□□□□ -1.74
LMO4P61968 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 RNVU1-6-201ENST00000364688 164 ntBASIC4.17□□□□□ -1.74
LMO4P61968 RNU4-7P-201ENST00000364758 141 ntBASIC4.17□□□□□ -1.74
LMO4P61968 MIR421-201ENST00000365696 85 ntBASIC4.17□□□□□ -1.74
LMO4P61968 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 GSTA12P-201ENST00000402398 508 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AL390316.1-201ENST00000406279 553 ntBASIC4.17□□□□□ -1.74
LMO4P61968 SNORA77-201ENST00000408716 125 ntBASIC4.17□□□□□ -1.74
LMO4P61968 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 AF186996.5-201ENST00000418098 904 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 MTCO2P23-201ENST00000425216 680 ntBASIC4.17□□□□□ -1.74
LMO4P61968 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMO4P61968 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.17□□□□□ -1.74
LMO4P61968 AL606490.7-201ENST00000433136 191 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC007563.3-201ENST00000433233 371 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.17□□□□□ -1.74
LMO4P61968 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 OR52J1P-201ENST00000450596 932 ntBASIC4.17□□□□□ -1.74
LMO4P61968 HSPE1P22-201ENST00000456856 327 ntBASIC4.17□□□□□ -1.74
LMO4P61968 MTCO2P6-201ENST00000463134 685 ntBASIC4.17□□□□□ -1.74
LMO4P61968 PPP1R11P1-201ENST00000486095 376 ntBASIC4.17□□□□□ -1.74
LMO4P61968 MTCO2P9-201ENST00000503214 694 ntBASIC4.17□□□□□ -1.74
LMO4P61968 FABP5P6-201ENST00000510588 409 ntBASIC4.17□□□□□ -1.74
LMO4P61968 OR7H2P-201ENST00000513483 306 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.17□□□□□ -1.74
LMO4P61968 AP000859.1-201ENST00000525536 307 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 AC137768.1-201ENST00000549998 553 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC087888.1-201ENST00000550884 1254 ntBASIC4.17□□□□□ -1.74
LMO4P61968 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.17□□□□□ -1.74
LMO4P61968 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 YWHAZP1-201ENST00000556286 722 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.17□□□□□ -1.74
LMO4P61968 AGGF1P5-201ENST00000567900 919 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC019322.1-201ENST00000571869 389 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.17□□□□□ -1.74
LMO4P61968 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 AC023762.1-201ENST00000603280 584 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC084373.1-201ENST00000603311 235 ntBASIC4.17□□□□□ -1.74
LMO4P61968 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.17□□□□□ -1.74
LMO4P61968 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.17□□□□□ -1.74
LMO4P61968 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
LMO4P61968 AP001153.1-201ENST00000641024 338 ntBASIC4.17□□□□□ -1.74
LMO4P61968 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms