Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CIR1P1-201ENST00000524055 1133 ntBASIC4.94□□□□□ -1.62
CDH13P55290 UBTFL9-201ENST00000534504 1148 ntBASIC4.94□□□□□ -1.62
CDH13P55290 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH13P55290 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH13P55290 AGGF1P9-201ENST00000561884 913 ntBASIC4.94□□□□□ -1.62
CDH13P55290 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH13P55290 AP005262.1-201ENST00000582646 997 ntBASIC4.94□□□□□ -1.62
CDH13P55290 RN7SL435P-201ENST00000584418 282 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH13P55290 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH13P55290 AC015911.5-201ENST00000587076 451 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH13P55290 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH13P55290 AL136370.1-201ENST00000608166 691 ntBASIC4.94□□□□□ -1.62
CDH13P55290 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH13P55290 AC024023.1-201ENST00000624530 922 ntBASIC4.94□□□□□ -1.62
CDH13P55290 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 SNORA17.5-201ENST00000630429 132 ntBASIC4.94□□□□□ -1.62
CDH13P55290 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH13P55290 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH13P55290 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH13P55290 AC027228.2-201ENST00000567141 2154 ntBASIC4.94□□□□□ -1.62
CDH13P55290 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 RN7SKP113-201ENST00000363891 295 ntBASIC4.93□□□□□ -1.62
CDH13P55290 RNA5SP132-201ENST00000364725 118 ntBASIC4.93□□□□□ -1.62
CDH13P55290 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH13P55290 RN7SKP97-201ENST00000410966 333 ntBASIC4.93□□□□□ -1.62
CDH13P55290 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH13P55290 AC108075.1-201ENST00000424692 529 ntBASIC4.93□□□□□ -1.62
CDH13P55290 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 MTCO1P52-201ENST00000433928 531 ntBASIC4.93□□□□□ -1.62
CDH13P55290 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH13P55290 MOB1AP2-201ENST00000446060 614 ntBASIC4.93□□□□□ -1.62
CDH13P55290 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 RNA5SP103-201ENST00000459503 118 ntBASIC4.93□□□□□ -1.62
CDH13P55290 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH13P55290 AC009127.1-201ENST00000467090 155 ntBASIC4.93□□□□□ -1.62
CDH13P55290 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
CDH13P55290 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 AC125612.1-201ENST00000547580 377 ntBASIC4.93□□□□□ -1.62
CDH13P55290 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 AC106785.3-201ENST00000564064 847 ntBASIC4.93□□□□□ -1.62
CDH13P55290 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.93□□□□□ -1.62
CDH13P55290 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.93□□□□□ -1.62
CDH13P55290 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 BNIP3P19-201ENST00000605397 577 ntBASIC4.93□□□□□ -1.62
CDH13P55290 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 AC079395.2-201ENST00000610982 737 ntBASIC4.93□□□□□ -1.62
CDH13P55290 AC253576.2-201ENST00000618815 580 ntBASIC4.93□□□□□ -1.62
CDH13P55290 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH13P55290 AP003400.6-201ENST00000624698 740 ntBASIC4.93□□□□□ -1.62
CDH13P55290 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 STX3-208ENST00000641815 3236 ntBASIC4.93□□□□□ -1.62
CDH13P55290 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH13P55290 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH13P55290 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 U3.2-201ENST00000362981 210 ntBASIC4.92□□□□□ -1.62
CDH13P55290 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 ATP5F1P6-201ENST00000402768 767 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AC105402.1-201ENST00000413336 545 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH13P55290 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 NPM1P39-201ENST00000449818 867 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 AL691482.1-201ENST00000453255 87 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms