Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNX6P1-201ENST00000601728 1224 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC130352.1-201ENST00000602979 661 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC079880.2-201ENST00000603790 1213 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC073137.1-201ENST00000605636 634 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC018695.5-201ENST00000605872 315 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AF129408.1-201ENST00000608767 431 ntBASIC4.72□□□□□ -1.65
CDH11P55287 RPSAP73-201ENST00000614820 330 ntBASIC4.72□□□□□ -1.65
CDH11P55287 OR8G7P-201ENST00000616658 848 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC016769.4-201ENST00000616893 535 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AL158062.1-201ENST00000619632 745 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AP002505.2-201ENST00000623585 696 ntBASIC4.72□□□□□ -1.65
CDH11P55287 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 AP000542.2-201ENST00000623199 6179 ntBASIC4.72□□□□□ -1.65
CDH11P55287 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 CDC27P2-201ENST00000425026 1922 ntBASIC4.72□□□□□ -1.65
CDH11P55287 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CDH11P55287 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 AL672167.1-204ENST00000641875 3017 ntBASIC4.71□□□□□ -1.66
CDH11P55287 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 BTBD10P1-201ENST00000549824 1352 ntBASIC4.71□□□□□ -1.66
CDH11P55287 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 RNA5SP183-201ENST00000362452 119 ntBASIC4.71□□□□□ -1.66
CDH11P55287 RNA5SP507-201ENST00000363603 121 ntBASIC4.71□□□□□ -1.66
CDH11P55287 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 SNORA67-201ENST00000384423 137 ntBASIC4.71□□□□□ -1.66
CDH11P55287 RNU6-1257P-201ENST00000384625 110 ntBASIC4.71□□□□□ -1.66
CDH11P55287 MT-TP-201ENST00000387461 68 ntBASIC4.71□□□□□ -1.66
CDH11P55287 RNA5SP339-201ENST00000390987 122 ntBASIC4.71□□□□□ -1.66
CDH11P55287 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH11P55287 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
CDH11P55287 PTMAP6-201ENST00000439110 327 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 GAPDHP25-201ENST00000447061 1001 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 CALM1P2-201ENST00000452941 448 ntBASIC4.71□□□□□ -1.66
CDH11P55287 CLIC4P1-201ENST00000453177 535 ntBASIC4.71□□□□□ -1.66
CDH11P55287 RPL32P14-201ENST00000463196 378 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC005532.2-201ENST00000467154 373 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC092905.1-201ENST00000467527 949 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC091544.1-201ENST00000484702 348 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH11P55287 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 MTCO3P27-201ENST00000514397 196 ntBASIC4.71□□□□□ -1.66
CDH11P55287 MTCYBP19-201ENST00000517463 1124 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC105031.1-201ENST00000518550 476 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CDH11P55287 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.71□□□□□ -1.66
CDH11P55287 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH11P55287 CBX3P2-202ENST00000583365 535 ntBASIC4.71□□□□□ -1.66
CDH11P55287 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH11P55287 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 AC005034.4-201ENST00000603612 899 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH11P55287 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 AC126915.2-201ENST00000610957 190 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC090772.4-201ENST00000623599 362 ntBASIC4.71□□□□□ -1.66
CDH11P55287 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.71□□□□□ -1.66
CDH11P55287 AC074101.1-201ENST00000637861 241 ntBASIC4.71□□□□□ -1.66
CDH11P55287 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CDH11P55287 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH11P55287 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CDH11P55287 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH11P55287 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH11P55287 RAD1P1-201ENST00000231383 813 ntBASIC4.7□□□□□ -1.66
CDH11P55287 RNU1-149P-201ENST00000390870 161 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AL133388.1-201ENST00000404509 287 ntBASIC4.7□□□□□ -1.66
CDH11P55287 RSL24D1P1-201ENST00000404972 493 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AL390316.1-201ENST00000406279 553 ntBASIC4.7□□□□□ -1.66
CDH11P55287 OR13Z1P-201ENST00000416141 834 ntBASIC4.7□□□□□ -1.66
CDH11P55287 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH11P55287 AL160175.1-201ENST00000428124 247 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms