Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 RNA5SP34-201ENST00000516887 130 ntBASIC4.3□□□□□ -1.72
POLR2JP52435 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.3□□□□□ -1.72
POLR2JP52435 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2JP52435 BGLT3-201ENST00000564523 994 ntBASIC4.3□□□□□ -1.72
POLR2JP52435 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
POLR2JP52435 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.3□□□□□ -1.72
POLR2JP52435 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
POLR2JP52435 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
POLR2JP52435 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.3□□□□□ -1.72
POLR2JP52435 OR51H2P-202ENST00000641424 3046 ntBASIC4.3□□□□□ -1.72
POLR2JP52435 ZNF137P-201ENST00000456718 1920 ntBASIC4.3□□□□□ -1.72
POLR2JP52435 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2JP52435 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
POLR2JP52435 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
POLR2JP52435 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2JP52435 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
POLR2JP52435 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
POLR2JP52435 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2JP52435 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 LINC00622-201ENST00000562811 1570 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2JP52435 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2JP52435 RNA5SP435-201ENST00000364044 108 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 SNORA71.2-201ENST00000364941 134 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 RNA5SP113-201ENST00000410486 84 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 AL356968.2-201ENST00000412769 1257 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 AC012671.1-201ENST00000451912 203 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2JP52435 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.29□□□□□ -1.72
POLR2JP52435 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2JP52435 SOX5P1-201ENST00000524155 1127 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2JP52435 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.29□□□□□ -1.72
POLR2JP52435 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2JP52435 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.29□□□□□ -1.72
POLR2JP52435 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.29□□□□□ -1.72
POLR2JP52435 AL160290.3-201ENST00000604869 165 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 AC244517.3-201ENST00000616254 1235 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 AL122125.1-201ENST00000616999 600 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 KARSP3-201ENST00000571212 1504 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 CPHL1P-201ENST00000461341 3407 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
POLR2JP52435 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2JP52435 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
POLR2JP52435 PROS2P-201ENST00000474651 1951 ntBASIC4.29□□□□□ -1.72
POLR2JP52435 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
POLR2JP52435 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2JP52435 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR2JP52435 Z98755.1-201ENST00000407015 1384 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
POLR2JP52435 SDHCP2-201ENST00000398565 501 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 VDAC2P1-201ENST00000399358 958 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 RN7SKP213-201ENST00000410746 298 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 SNORA74C-2-201ENST00000411179 201 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2JP52435 ATG4AP1-201ENST00000416893 538 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 AC004074.1-201ENST00000421810 1063 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 GTF2IP2-201ENST00000424290 697 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 NPM1P22-201ENST00000427761 952 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR2JP52435 AC005154.2-201ENST00000438110 379 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 RPL12P11-201ENST00000439970 501 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 RPL7P33-201ENST00000444159 742 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 AC006967.1-201ENST00000467608 589 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 AC006499.6-201ENST00000511169 607 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR2JP52435 OR10D4P-201ENST00000525892 951 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.28□□□□□ -1.72
POLR2JP52435 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR2JP52435 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.28□□□□□ -1.72
POLR2JP52435 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2JP52435 Z98200.1-201ENST00000607298 470 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 AF117829.2-201ENST00000619538 361 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
POLR2JP52435 AC138627.1-204ENST00000641894 765 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2JP52435 AC027290.2-201ENST00000623210 18662 ntBASIC4.28□□□□□ -1.72
POLR2JP52435 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2JP52435 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
POLR2JP52435 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2JP52435 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2JP52435 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
POLR2JP52435 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2JP52435 LINC01109-201ENST00000603837 3081 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms