Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MIR200C-201ENST00000384980 68 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 AP000357.1-201ENST00000409926 1165 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 AP001267.4-201ENST00000602598 545 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BRCA2P51587 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRCA2P51587 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
BRCA2P51587 RNA5SP72-201ENST00000364442 117 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCA2P51587 RN7SL429P-201ENST00000479090 223 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 RN7SL489P-201ENST00000486185 223 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 RN7SL327P-201ENST00000488659 223 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCA2P51587 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCA2P51587 AC007786.3-201ENST00000615154 596 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 RN7SL853P-201ENST00000617250 223 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCA2P51587 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCA2P51587 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRCA2P51587 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCA2P51587 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 AC008549.2-201ENST00000333482 706 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCA2P51587 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.81□□□□□ -1.64
BRCA2P51587 ACTR3P3-201ENST00000480448 893 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 UG0898H09-202ENST00000623646 7040 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 OR4A15-201ENST00000314706 1035 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 MIR490-201ENST00000384865 128 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.81□□□□□ -1.64
BRCA2P51587 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 AC098799.3-201ENST00000506095 438 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 AC090136.1-201ENST00000520009 240 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.81□□□□□ -1.64
BRCA2P51587 MIR5195-201ENST00000583555 115 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
BRCA2P51587 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCA2P51587 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
BRCA2P51587 AL035696.2-201ENST00000407941 709 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 RPL6P29-201ENST00000414863 865 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 MTND2P40-201ENST00000436718 841 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 AC115115.1-201ENST00000449927 248 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.81□□□□□ -1.64
BRCA2P51587 PARP4P3-201ENST00000510265 317 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.81□□□□□ -1.64
BRCA2P51587 AC010608.2-201ENST00000624830 470 ntBASIC4.81□□□□□ -1.64
BRCA2P51587 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCA2P51587 AC073346.2-201ENST00000624724 2058 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCA2P51587 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BRCA2P51587 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCA2P51587 AC016559.2-201ENST00000510759 359 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCA2P51587 AC023762.1-201ENST00000603280 584 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 AC016588.2-201ENST00000632484 3021 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
BRCA2P51587 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 MAPK10-349ENST00000641767 3661 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCA2P51587 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCA2P51587 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.8□□□□□ -1.64
BRCA2P51587 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCA2P51587 AC010680.3-201ENST00000604215 520 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.8□□□□□ -1.64
BRCA2P51587 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRCA2P51587 AL603750.1-201ENST00000624216 1717 ntBASIC4.8□□□□□ -1.64
BRCA2P51587 Y_RNA.500-201ENST00000384466 111 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 RPL21P43-201ENST00000425440 472 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 SCARNA14-201ENST00000516903 136 ntBASIC4.79□□□□□ -1.64
BRCA2P51587 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.79□□□□□ -1.64
BRCA2P51587 AC090312.1-201ENST00000580637 348 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms