Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
LHX1P48742 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LHX1P48742 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LHX1P48742 AC004817.4-201ENST00000602396 3625 ntBASIC5.16□□□□□ -1.58
LHX1P48742 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
LHX1P48742 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
LHX1P48742 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX1P48742 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.16□□□□□ -1.58
LHX1P48742 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LHX1P48742 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LHX1P48742 RNA5SP191-201ENST00000362585 102 ntBASIC5.16□□□□□ -1.58
LHX1P48742 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LHX1P48742 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LHX1P48742 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.16□□□□□ -1.58
LHX1P48742 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LHX1P48742 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.16□□□□□ -1.58
LHX1P48742 MTND4P15-201ENST00000437913 1033 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX1P48742 ARAFP2-201ENST00000440565 559 ntBASIC5.16□□□□□ -1.58
LHX1P48742 Z80107.2-201ENST00000445127 392 ntBASIC5.16□□□□□ -1.58
LHX1P48742 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
LHX1P48742 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.16□□□□□ -1.58
LHX1P48742 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.16□□□□□ -1.58
LHX1P48742 RN7SL558P-201ENST00000497468 299 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.16□□□□□ -1.58
LHX1P48742 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.16□□□□□ -1.58
LHX1P48742 ENPP7P9-201ENST00000514456 627 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AL671862.1-201ENST00000515851 349 ntBASIC5.16□□□□□ -1.58
LHX1P48742 RN7SKP276-201ENST00000516242 268 ntBASIC5.16□□□□□ -1.58
LHX1P48742 FTH1P11-201ENST00000517577 551 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.16□□□□□ -1.58
LHX1P48742 OR8K2P-201ENST00000524645 927 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AP001880.2-201ENST00000538233 448 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.16□□□□□ -1.58
LHX1P48742 MIR4700-201ENST00000578311 74 ntBASIC5.16□□□□□ -1.58
LHX1P48742 MIR4270-201ENST00000581799 70 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AC022726.1-201ENST00000587475 207 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AC040174.2-201ENST00000602701 465 ntBASIC5.16□□□□□ -1.58
LHX1P48742 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX1P48742 FAM27B-201ENST00000610601 213 ntBASIC5.16□□□□□ -1.58
LHX1P48742 AC079298.2-201ENST00000623885 459 ntBASIC5.16□□□□□ -1.58
LHX1P48742 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.16□□□□□ -1.58
LHX1P48742 AC005005.4-201ENST00000623789 16698 ntBASIC5.16□□□□□ -1.58
LHX1P48742 MTCO1P7-201ENST00000419523 1542 ntBASIC5.16□□□□□ -1.58
LHX1P48742 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.16□□□□□ -1.58
LHX1P48742 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LHX1P48742 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LHX1P48742 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX1P48742 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
LHX1P48742 ADAM5-202ENST00000399789 1942 ntBASIC5.15□□□□□ -1.58
LHX1P48742 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LHX1P48742 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
LHX1P48742 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.15□□□□□ -1.58
LHX1P48742 RNA5SP187-201ENST00000384400 119 ntBASIC5.15□□□□□ -1.59
LHX1P48742 U3.30-201ENST00000391308 210 ntBASIC5.15□□□□□ -1.59
LHX1P48742 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LHX1P48742 BX510359.2-201ENST00000417920 305 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AL121878.1-201ENST00000418638 859 ntBASIC5.15□□□□□ -1.59
LHX1P48742 LINC00993-201ENST00000420453 540 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AC004074.1-201ENST00000421810 1063 ntBASIC5.15□□□□□ -1.59
LHX1P48742 RPS17P8-201ENST00000434525 335 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AL451139.1-201ENST00000434718 346 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.15□□□□□ -1.59
LHX1P48742 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.15□□□□□ -1.59
LHX1P48742 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.15□□□□□ -1.59
LHX1P48742 MTND2P25-201ENST00000449028 610 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AC010733.1-201ENST00000451515 401 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
LHX1P48742 LARP7P4-201ENST00000481075 878 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AC011005.3-201ENST00000491624 395 ntBASIC5.15□□□□□ -1.59
LHX1P48742 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.15□□□□□ -1.59
LHX1P48742 AC016550.3-201ENST00000515706 767 ntBASIC5.15□□□□□ -1.59
LHX1P48742 RNA5SP230-201ENST00000517039 122 ntBASIC5.15□□□□□ -1.59
LHX1P48742 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.15□□□□□ -1.59
LHX1P48742 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.15□□□□□ -1.59
LHX1P48742 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.15□□□□□ -1.59
LHX1P48742 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.15□□□□□ -1.59
LHX1P48742 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.15□□□□□ -1.59
LHX1P48742 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.15□□□□□ -1.59
LHX1P48742 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.15□□□□□ -1.59
LHX1P48742 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.15□□□□□ -1.59
LHX1P48742 AL022401.1-201ENST00000619498 108 ntBASIC5.15□□□□□ -1.59
LHX1P48742 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LHX1P48742 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.15□□□□□ -1.59
LHX1P48742 OR9K1P-202ENST00000641111 3217 ntBASIC5.15□□□□□ -1.59
LHX1P48742 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LHX1P48742 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.15□□□□□ -1.59
LHX1P48742 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LHX1P48742 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LHX1P48742 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.15□□□□□ -1.59
LHX1P48742 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LHX1P48742 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX1P48742 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX1P48742 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LHX1P48742 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LHX1P48742 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LHX1P48742 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.14□□□□□ -1.59
LHX1P48742 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms