Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RNA5SP113-201ENST00000410486 84 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 RN7SKP247-201ENST00000411094 308 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 ZFAND6P1-201ENST00000434138 605 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC046176.1-201ENST00000435260 1170 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.36□□□□□ -1.55
MTHFRP42898 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.36□□□□□ -1.55
MTHFRP42898 CALM1P2-201ENST00000452941 448 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MTHFRP42898 AC022133.1-201ENST00000490961 571 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
MTHFRP42898 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MTHFRP42898 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MTHFRP42898 COL6A4P2-205ENST00000509855 506 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC091912.1-201ENST00000511351 248 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 SCARNA20.4-201ENST00000516969 131 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.36□□□□□ -1.55
MTHFRP42898 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.36□□□□□ -1.55
MTHFRP42898 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
MTHFRP42898 SETP1-201ENST00000556014 845 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
MTHFRP42898 MIR5096-201ENST00000583713 70 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.36□□□□□ -1.55
MTHFRP42898 AC105254.2-201ENST00000603636 436 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AL162431.4-201ENST00000604674 411 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC034236.3-201ENST00000605999 461 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC083809.1-201ENST00000615051 472 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.36□□□□□ -1.55
MTHFRP42898 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AC016717.3-201ENST00000624730 554 ntBASIC5.36□□□□□ -1.55
MTHFRP42898 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.36□□□□□ -1.55
MTHFRP42898 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AC079097.1-201ENST00000512187 1399 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 RNU6-178P-201ENST00000384631 104 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 MT-TP-201ENST00000387461 68 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 GLULP6-201ENST00000399502 913 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 SETP15-201ENST00000412724 337 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AC093716.1-201ENST00000435923 377 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AP000936.3-201ENST00000438127 255 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 OR7E125P-201ENST00000443450 846 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 GAPDHP14-201ENST00000450472 937 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AP002345.1-201ENST00000456493 928 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 EIF2S2P4-201ENST00000461070 984 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 RPS23P7-201ENST00000466210 444 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 RNA5SP43-201ENST00000516559 110 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AC034205.1-201ENST00000520621 638 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AC022360.1-201ENST00000521058 340 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.35□□□□□ -1.55
MTHFRP42898 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.35□□□□□ -1.55
MTHFRP42898 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.35□□□□□ -1.55
MTHFRP42898 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AL512782.1-201ENST00000603093 364 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AC009237.13-201ENST00000603193 276 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.35□□□□□ -1.55
MTHFRP42898 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.35□□□□□ -1.55
MTHFRP42898 AC010632.3-201ENST00000611377 369 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
MTHFRP42898 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.35□□□□□ -1.55
MTHFRP42898 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MTHFRP42898 AL450326.2-201ENST00000421913 1962 ntBASIC5.35□□□□□ -1.55
MTHFRP42898 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MTHFRP42898 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.34□□□□□ -1.55
MTHFRP42898 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
MTHFRP42898 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MTHFRP42898 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MTHFRP42898 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.34□□□□□ -1.55
MTHFRP42898 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
MTHFRP42898 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
MTHFRP42898 SNORA70.2-201ENST00000364506 135 ntBASIC5.34□□□□□ -1.55
MTHFRP42898 RN7SKP153-201ENST00000365026 316 ntBASIC5.34□□□□□ -1.55
MTHFRP42898 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MTHFRP42898 RPS3AP23-201ENST00000401762 784 ntBASIC5.34□□□□□ -1.55
MTHFRP42898 USP9YP19-201ENST00000412165 485 ntBASIC5.34□□□□□ -1.55
MTHFRP42898 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.34□□□□□ -1.55
MTHFRP42898 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.34□□□□□ -1.55
MTHFRP42898 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.34□□□□□ -1.55
MTHFRP42898 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms