Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CTNNA1P35221 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTNNA1P35221 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTNNA1P35221 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTNNA1P35221 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CTNNA1P35221 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.28□□□□□ -1.56
CTNNA1P35221 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CTNNA1P35221 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CTNNA1P35221 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 RNA5SP132-201ENST00000364725 118 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 SNORA17A-201ENST00000391185 133 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 Z86062.1-201ENST00000406773 777 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 TMBIM7P-201ENST00000418074 855 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 EIF4A1P1-201ENST00000420241 934 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC104843.2-201ENST00000427666 297 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AL160175.1-201ENST00000428124 247 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 RPL7L1P9-201ENST00000431298 745 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 CYCSP34-201ENST00000458172 304 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 MTND6P6-201ENST00000478031 263 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 RN7SL717P-201ENST00000478343 297 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 MTCO1P31-201ENST00000506355 492 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 PGBD4P4-201ENST00000509673 613 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 SNORD95-201ENST00000579879 68 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AL008729.2-201ENST00000606393 473 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AC055764.2-201ENST00000610089 670 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 CR589904.2-201ENST00000612533 440 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AC004477.3-201ENST00000614061 590 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 AC116563.2-201ENST00000624751 535 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 SNORA17.5-201ENST00000630429 132 ntBASIC5.27□□□□□ -1.57
CTNNA1P35221 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.27□□□□□ -1.57
CTNNA1P35221 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.27□□□□□ -1.57
CTNNA1P35221 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTNNA1P35221 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.27□□□□□ -1.57
CTNNA1P35221 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.26□□□□□ -1.57
CTNNA1P35221 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.26□□□□□ -1.57
CTNNA1P35221 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CTNNA1P35221 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTNNA1P35221 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.26□□□□□ -1.57
CTNNA1P35221 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CTNNA1P35221 RNU4-31P-201ENST00000384211 141 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 MIR1282-201ENST00000408865 101 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 RN7SKP114-201ENST00000410327 279 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 GSTM3P2-201ENST00000412746 530 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.26□□□□□ -1.57
CTNNA1P35221 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTNNA1P35221 PCNPP2-201ENST00000441651 455 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 HMGB1P5-202ENST00000451497 985 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 AC090686.1-201ENST00000481577 749 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CTNNA1P35221 PGAM1P13-201ENST00000507497 754 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 IGKV2D-10-201ENST00000520194 281 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AC012339.2-201ENST00000523996 453 ntBASIC5.26□□□□□ -1.57
CTNNA1P35221 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.26□□□□□ -1.57
CTNNA1P35221 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms