Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.49□□□□□ -1.69
SHC1P29353 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.49□□□□□ -1.69
SHC1P29353 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHC1P29353 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHC1P29353 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHC1P29353 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHC1P29353 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHC1P29353 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHC1P29353 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.49□□□□□ -1.69
SHC1P29353 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.49□□□□□ -1.69
SHC1P29353 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.49□□□□□ -1.69
SHC1P29353 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHC1P29353 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 CHEK2P3-201ENST00000416118 248 ntBASIC4.48□□□□□ -1.69
SHC1P29353 NPM1P22-201ENST00000427761 952 ntBASIC4.48□□□□□ -1.69
SHC1P29353 BRWD1P3-201ENST00000428816 390 ntBASIC4.48□□□□□ -1.69
SHC1P29353 LYPLA1P1-201ENST00000434514 622 ntBASIC4.48□□□□□ -1.69
SHC1P29353 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.48□□□□□ -1.69
SHC1P29353 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 AP000942.1-201ENST00000463969 747 ntBASIC4.48□□□□□ -1.69
SHC1P29353 RN7SL329P-201ENST00000467740 299 ntBASIC4.48□□□□□ -1.69
SHC1P29353 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC008410.1-201ENST00000483777 339 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC104629.1-201ENST00000494226 508 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC140172.1-201ENST00000502928 141 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.48□□□□□ -1.69
SHC1P29353 RNA5SP464-201ENST00000516251 108 ntBASIC4.48□□□□□ -1.69
SHC1P29353 RNA5SP392-201ENST00000516905 112 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC104997.1-201ENST00000519761 717 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 OR10D4P-201ENST00000525892 951 ntBASIC4.48□□□□□ -1.69
SHC1P29353 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.48□□□□□ -1.69
SHC1P29353 AC012414.2-201ENST00000559474 187 ntBASIC4.48□□□□□ -1.69
SHC1P29353 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.48□□□□□ -1.69
SHC1P29353 LINC00557-201ENST00000563184 1279 ntBASIC4.48□□□□□ -1.69
SHC1P29353 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 AC040174.2-201ENST00000602701 465 ntBASIC4.48□□□□□ -1.69
SHC1P29353 RNF138P2-201ENST00000603490 592 ntBASIC4.48□□□□□ -1.69
SHC1P29353 BNIP3P19-201ENST00000605397 577 ntBASIC4.48□□□□□ -1.69
SHC1P29353 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.48□□□□□ -1.69
SHC1P29353 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 IRF5P1-201ENST00000504852 2164 ntBASIC4.48□□□□□ -1.69
SHC1P29353 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SHC1P29353 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SHC1P29353 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHC1P29353 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHC1P29353 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHC1P29353 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.47□□□□□ -1.69
SHC1P29353 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHC1P29353 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHC1P29353 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SHC1P29353 SNORA74A-201ENST00000364089 198 ntBASIC4.47□□□□□ -1.69
SHC1P29353 RNU6-670P-201ENST00000364312 104 ntBASIC4.47□□□□□ -1.69
SHC1P29353 SNORA51.8-201ENST00000384234 132 ntBASIC4.47□□□□□ -1.69
SHC1P29353 CHMP1B2P-201ENST00000399581 597 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC098592.2-201ENST00000413158 265 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.47□□□□□ -1.69
SHC1P29353 VN1R31P-201ENST00000417498 730 ntBASIC4.47□□□□□ -1.69
SHC1P29353 TMBIM7P-201ENST00000418074 855 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.47□□□□□ -1.69
SHC1P29353 OR2AM1P-201ENST00000422137 422 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.47□□□□□ -1.69
SHC1P29353 RPL7P11-201ENST00000437586 658 ntBASIC4.47□□□□□ -1.69
SHC1P29353 RAB9AP5-201ENST00000437794 597 ntBASIC4.47□□□□□ -1.69
SHC1P29353 PA2G4P6-201ENST00000438325 1197 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.47□□□□□ -1.69
SHC1P29353 NPM1P33-201ENST00000438918 872 ntBASIC4.47□□□□□ -1.69
SHC1P29353 RPL12P3-201ENST00000440080 396 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC073052.1-201ENST00000440417 714 ntBASIC4.47□□□□□ -1.69
SHC1P29353 ARAFP2-201ENST00000440565 559 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AL158053.1-201ENST00000441503 453 ntBASIC4.47□□□□□ -1.69
SHC1P29353 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.47□□□□□ -1.69
SHC1P29353 RAB9AP2-201ENST00000443911 597 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHC1P29353 OTX2P1-201ENST00000450956 354 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AL353718.1-201ENST00000451028 517 ntBASIC4.47□□□□□ -1.69
SHC1P29353 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.47□□□□□ -1.69
SHC1P29353 SEPT7P3-201ENST00000455017 621 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.47□□□□□ -1.69
SHC1P29353 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHC1P29353 MTND6P32-201ENST00000457611 483 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC098583.1-201ENST00000480875 255 ntBASIC4.47□□□□□ -1.69
SHC1P29353 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms