Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
LMNB1P20700 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LMNB1P20700 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.14□□□□□ -1.27
LMNB1P20700 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.14□□□□□ -1.27
LMNB1P20700 CYP2C60P-201ENST00000566088 139 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 MIR3189-201ENST00000578735 73 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.14□□□□□ -1.27
LMNB1P20700 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.14□□□□□ -1.27
LMNB1P20700 AC005332.10-201ENST00000612725 619 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 WT1-AS_8.1-201ENST00000615200 275 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 AC099842.1-201ENST00000619919 596 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 AC025263.3-201ENST00000622965 1396 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 AC010435.1-201ENST00000623353 1177 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.14□□□□□ -1.27
LMNB1P20700 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.14□□□□□ -1.27
LMNB1P20700 SAMMSON-209ENST00000641222 1100 ntBASIC7.14□□□□□ -1.27
LMNB1P20700 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.14□□□□□ -1.27
LMNB1P20700 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LMNB1P20700 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
LMNB1P20700 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LMNB1P20700 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LMNB1P20700 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 AC009779.8-201ENST00000641684 4384 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
LMNB1P20700 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.13□□□□□ -1.27
LMNB1P20700 BIN2P1-201ENST00000504996 1530 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 AC005832.2-201ENST00000538921 1430 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 RNA5SP131-201ENST00000365452 119 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 HMGB3P18-201ENST00000406327 590 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 UBE2V1P10-201ENST00000414685 269 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 RAD23BP2-201ENST00000416003 1207 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC7.13□□□□□ -1.27
LMNB1P20700 OR6C64P-201ENST00000419708 825 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 AL133173.1-201ENST00000423458 397 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 OR52B5P-201ENST00000435337 951 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AL354941.1-201ENST00000438600 464 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.13□□□□□ -1.27
LMNB1P20700 AC097499.1-201ENST00000444277 208 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.13□□□□□ -1.27
LMNB1P20700 AZGP1P2-201ENST00000454506 345 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 RN7SL51P-201ENST00000468230 285 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 AC090638.1-201ENST00000498296 909 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC104090.1-201ENST00000506341 1171 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 BTG4P1-201ENST00000510421 183 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.13□□□□□ -1.27
LMNB1P20700 KCTD9P4-201ENST00000526766 1166 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AP001804.1-201ENST00000526868 919 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC022832.1-201ENST00000530718 645 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC073916.1-201ENST00000545095 130 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
LMNB1P20700 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.13□□□□□ -1.27
LMNB1P20700 HIGD1AP17-201ENST00000554576 276 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 OR1F2P-201ENST00000570470 933 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.13□□□□□ -1.27
LMNB1P20700 MTATP6P3-201ENST00000581686 676 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.13□□□□□ -1.27
LMNB1P20700 VN1R82P-201ENST00000601481 356 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC091193.1-201ENST00000604640 448 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC018628.1-201ENST00000624147 3819 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 OR52B5P-202ENST00000641118 1110 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 OR11H2-202ENST00000641517 1085 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LMNB1P20700 AL033543.1-201ENST00000623440 13454 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 AC000367.1-201ENST00000452711 1766 ntBASIC7.13□□□□□ -1.27
LMNB1P20700 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
LMNB1P20700 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 HDAC1P2-201ENST00000453661 1398 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
LMNB1P20700 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.12□□□□□ -1.27
LMNB1P20700 RPL23P2-201ENST00000320371 421 ntBASIC7.12□□□□□ -1.27
LMNB1P20700 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
LMNB1P20700 MIR142-201ENST00000384835 87 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms