Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC013429.2-201ENST00000418798 781 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AL450023.3-201ENST00000440592 271 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 IGHV5-78-201ENST00000450948 295 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 PPIAP21-201ENST00000464473 501 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 RPS27AP16-201ENST00000492222 470 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 COX6B1P5-201ENST00000509843 249 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 SNORA48.9-201ENST00000516419 162 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC012339.2-201ENST00000523996 453 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 OR7E128P-201ENST00000532736 1024 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AGGF1P9-201ENST00000561884 913 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC011840.5-201ENST00000582125 771 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC012557.1-201ENST00000607115 611 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AC079298.2-201ENST00000623885 459 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AL451142.2-201ENST00000429076 2090 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 ASNSP1-201ENST00000518311 1939 ntBASIC5.07□□□□□ -1.6
HLA-DPA1P20036 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPA1P20036 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 PHKBP1-201ENST00000450951 1951 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC073136.1-201ENST00000449426 2884 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 SNORA74A-201ENST00000364089 198 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 MIR765-201ENST00000390226 114 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LRRC37BP1-201ENST00000398851 714 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 CHMP1B2P-201ENST00000399581 597 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 EIF4A1P3-201ENST00000411521 244 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 TRGV6-201ENST00000417928 299 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LYPLA1P1-201ENST00000434514 622 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 TCEA1P1-201ENST00000449716 880 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC090114.3-201ENST00000479267 829 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 RN7SL244P-201ENST00000493405 297 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC108157.1-201ENST00000510511 539 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC009852.2-201ENST00000567898 485 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC006116.3-201ENST00000592968 361 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC090948.2-201ENST00000607363 564 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AL021707.7-201ENST00000607991 416 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 LINC01739-205ENST00000641890 573 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC104118.1-201ENST00000607625 1589 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC011447.7-201ENST00000624228 1590 ntBASIC5.06□□□□□ -1.6
HLA-DPA1P20036 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPA1P20036 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 PCAT14-202ENST00000627127 3935 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 AC093535.2-201ENST00000624769 2326 ntBASIC5.05□□□□□ -1.6
HLA-DPA1P20036 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPA1P20036 RNU1-106P-201ENST00000384382 164 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms