Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.21□□□□□ -1.58
VTNP04004 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VTNP04004 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VTNP04004 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
VTNP04004 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTNP04004 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VTNP04004 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
VTNP04004 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTNP04004 RAB28P1-201ENST00000411517 641 ntBASIC5.2□□□□□ -1.58
VTNP04004 OR51B3P-201ENST00000412287 913 ntBASIC5.2□□□□□ -1.58
VTNP04004 AC096644.3-201ENST00000416788 338 ntBASIC5.2□□□□□ -1.58
VTNP04004 RPEP3-201ENST00000425462 676 ntBASIC5.2□□□□□ -1.58
VTNP04004 CNOT7P1-201ENST00000429006 852 ntBASIC5.2□□□□□ -1.58
VTNP04004 AC114878.1-201ENST00000441166 358 ntBASIC5.2□□□□□ -1.58
VTNP04004 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.2□□□□□ -1.58
VTNP04004 TPRKBP1-201ENST00000456243 481 ntBASIC5.2□□□□□ -1.58
VTNP04004 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.2□□□□□ -1.58
VTNP04004 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.2□□□□□ -1.58
VTNP04004 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.2□□□□□ -1.58
VTNP04004 RPL23AP53-201ENST00000521854 457 ntBASIC5.2□□□□□ -1.58
VTNP04004 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.2□□□□□ -1.58
VTNP04004 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VTNP04004 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.2□□□□□ -1.58
VTNP04004 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.2□□□□□ -1.58
VTNP04004 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.2□□□□□ -1.58
VTNP04004 AC073137.1-201ENST00000605636 634 ntBASIC5.2□□□□□ -1.58
VTNP04004 Z95327.3-201ENST00000610385 572 ntBASIC5.2□□□□□ -1.58
VTNP04004 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.2□□□□□ -1.58
VTNP04004 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
VTNP04004 AC092111.2-201ENST00000611627 1414 ntBASIC5.2□□□□□ -1.58
VTNP04004 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VTNP04004 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.2□□□□□ -1.58
VTNP04004 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 AC005261.6-201ENST00000623072 1387 ntBASIC5.19□□□□□ -1.58
VTNP04004 AC139713.2-214ENST00000642059 1811 ntBASIC5.19□□□□□ -1.58
VTNP04004 RNU6-1331P-201ENST00000363658 106 ntBASIC5.19□□□□□ -1.58
VTNP04004 U3.22-201ENST00000391120 215 ntBASIC5.19□□□□□ -1.58
VTNP04004 RNA5SP397-201ENST00000391323 118 ntBASIC5.19□□□□□ -1.58
VTNP04004 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 AC098592.2-201ENST00000413158 265 ntBASIC5.19□□□□□ -1.58
VTNP04004 P2RY10P2-201ENST00000416730 913 ntBASIC5.19□□□□□ -1.58
VTNP04004 GLUD1P9-201ENST00000420997 1173 ntBASIC5.19□□□□□ -1.58
VTNP04004 RPS27AP7-201ENST00000422792 455 ntBASIC5.19□□□□□ -1.58
VTNP04004 RGS17P1-201ENST00000423358 553 ntBASIC5.19□□□□□ -1.58
VTNP04004 RPL18P10-201ENST00000425606 538 ntBASIC5.19□□□□□ -1.58
VTNP04004 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.19□□□□□ -1.58
VTNP04004 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.19□□□□□ -1.58
VTNP04004 RPL35AP21-201ENST00000437667 333 ntBASIC5.19□□□□□ -1.58
VTNP04004 RAB9AP5-201ENST00000437794 597 ntBASIC5.19□□□□□ -1.58
VTNP04004 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.19□□□□□ -1.58
VTNP04004 RAB9AP2-201ENST00000443911 597 ntBASIC5.19□□□□□ -1.58
VTNP04004 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.19□□□□□ -1.58
VTNP04004 AC017099.1-201ENST00000448261 1028 ntBASIC5.19□□□□□ -1.58
VTNP04004 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.19□□□□□ -1.58
VTNP04004 MTND2P3-201ENST00000452458 470 ntBASIC5.19□□□□□ -1.58
VTNP04004 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.19□□□□□ -1.58
VTNP04004 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.19□□□□□ -1.58
VTNP04004 AC034205.1-201ENST00000520621 638 ntBASIC5.19□□□□□ -1.58
VTNP04004 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.19□□□□□ -1.58
VTNP04004 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.19□□□□□ -1.58
VTNP04004 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.19□□□□□ -1.58
VTNP04004 AL049830.4-201ENST00000555149 351 ntBASIC5.19□□□□□ -1.58
VTNP04004 RPL12P25-202ENST00000598100 674 ntBASIC5.19□□□□□ -1.58
VTNP04004 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 QTRT1P1-201ENST00000604344 1078 ntBASIC5.19□□□□□ -1.58
VTNP04004 OR7A19P-201ENST00000608051 733 ntBASIC5.19□□□□□ -1.58
VTNP04004 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VTNP04004 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VTNP04004 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VTNP04004 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.19□□□□□ -1.58
VTNP04004 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.19□□□□□ -1.58
VTNP04004 AL137100.1-201ENST00000556703 1620 ntBASIC5.19□□□□□ -1.58
VTNP04004 AC002525.1-201ENST00000624392 1622 ntBASIC5.19□□□□□ -1.58
VTNP04004 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VTNP04004 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VTNP04004 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.18□□□□□ -1.58
VTNP04004 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.18□□□□□ -1.58
VTNP04004 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
VTNP04004 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.18□□□□□ -1.58
VTNP04004 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VTNP04004 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.18□□□□□ -1.58
VTNP04004 IGKV7-3-201ENST00000357453 298 ntBASIC5.18□□□□□ -1.58
VTNP04004 RPL32P3-201ENST00000359025 275 ntBASIC5.18□□□□□ -1.58
VTNP04004 RN7SKP267-201ENST00000410381 285 ntBASIC5.18□□□□□ -1.58
VTNP04004 VN1R31P-201ENST00000417498 730 ntBASIC5.18□□□□□ -1.58
VTNP04004 COX6CP17-201ENST00000421389 185 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms