Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RN7SKP17-201ENST00000411242 351 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFBP01127 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.06□□□□□ -1.6
PDGFBP01127 AC006946.1-201ENST00000429106 328 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AC023141.6-201ENST00000429418 337 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 MTCYBP29-201ENST00000436327 1006 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 RPL12P18-201ENST00000437175 325 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 MED28P3-201ENST00000444288 531 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AL591623.2-201ENST00000449978 222 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 Z95152.1-201ENST00000453556 656 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 RN7SL189P-201ENST00000468631 289 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 NIP7P2-201ENST00000485801 544 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFBP01127 AC091912.1-201ENST00000511351 248 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.06□□□□□ -1.6
PDGFBP01127 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 MED28P5-201ENST00000528254 438 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFBP01127 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.06□□□□□ -1.6
PDGFBP01127 AP005119.2-201ENST00000579735 1105 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.06□□□□□ -1.6
PDGFBP01127 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 HMGB1P51-201ENST00000605166 638 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFBP01127 AL121890.3-201ENST00000618494 516 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PDGFBP01127 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 AL359715.3-201ENST00000569267 2123 ntBASIC5.06□□□□□ -1.6
PDGFBP01127 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFBP01127 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PDGFBP01127 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFBP01127 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC107027.3-201ENST00000565095 3473 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 FABP7P1-201ENST00000424004 391 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 MTND2P2-201ENST00000434633 945 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 AL161722.2-201ENST00000434731 981 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 AC046176.1-201ENST00000435260 1170 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PDGFBP01127 SLC25A18P1-201ENST00000449385 454 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC090602.1-201ENST00000469695 252 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
PDGFBP01127 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 ENPP7P9-201ENST00000514456 627 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 RNA5SP392-201ENST00000516905 112 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.05□□□□□ -1.6
PDGFBP01127 OR4V1P-201ENST00000525394 1140 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFBP01127 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 MTCO2P22-201ENST00000603246 681 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 ZYXP1-201ENST00000617638 118 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 AP002967.1-201ENST00000624203 539 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 AC068446.1-201ENST00000556425 1549 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 AL031595.2-201ENST00000624215 19071 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFBP01127 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDGFBP01127 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PDGFBP01127 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFBP01127 CASC19-284ENST00000642142 1868 ntBASIC5.05□□□□□ -1.6
PDGFBP01127 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PDGFBP01127 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFBP01127 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFBP01127 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFBP01127 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFBP01127 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFBP01127 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PDGFBP01127 SNORA77-201ENST00000408716 125 ntBASIC5.04□□□□□ -1.6
PDGFBP01127 CYCSP11-201ENST00000436426 315 ntBASIC5.04□□□□□ -1.6
PDGFBP01127 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms