Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MIR1271-201ENST00000408537 86 ntBASIC4.79□□□□□ -1.64
SSX4O60224 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX4O60224 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 OR2AH1P-201ENST00000425717 928 ntBASIC4.79□□□□□ -1.64
SSX4O60224 RPS4XP16-201ENST00000427198 791 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC005189.1-201ENST00000431286 310 ntBASIC4.79□□□□□ -1.64
SSX4O60224 RPL7L1P9-201ENST00000431298 745 ntBASIC4.79□□□□□ -1.64
SSX4O60224 MTCO1P43-201ENST00000431831 488 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 GAPDHP58-201ENST00000438477 1006 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SSX4O60224 AZGP1P2-201ENST00000454506 345 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC008379.1-201ENST00000463655 464 ntBASIC4.79□□□□□ -1.64
SSX4O60224 RPS23P2-201ENST00000463671 415 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 EIF1P7-201ENST00000487533 337 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.79□□□□□ -1.64
SSX4O60224 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 HAUS8P1-201ENST00000549005 542 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 CD24P2-201ENST00000565486 219 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC106734.1-201ENST00000568646 663 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.79□□□□□ -1.64
SSX4O60224 EIF1P5-201ENST00000585002 234 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC004948.1-201ENST00000609858 672 ntBASIC4.79□□□□□ -1.64
SSX4O60224 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 AL139407.1-201ENST00000613826 1175 ntBASIC4.79□□□□□ -1.64
SSX4O60224 AC016957.2-201ENST00000616998 848 ntBASIC4.79□□□□□ -1.64
SSX4O60224 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSX4O60224 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 AC097461.1-201ENST00000568928 2821 ntBASIC4.79□□□□□ -1.64
SSX4O60224 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSX4O60224 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSX4O60224 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SSX4O60224 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 AC027228.2-201ENST00000567141 2154 ntBASIC4.78□□□□□ -1.64
SSX4O60224 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.78□□□□□ -1.64
SSX4O60224 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSX4O60224 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSX4O60224 MIR937-201ENST00000401271 86 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AL359643.1-201ENST00000404109 423 ntBASIC4.78□□□□□ -1.64
SSX4O60224 HMGB1P13-201ENST00000406019 642 ntBASIC4.78□□□□□ -1.64
SSX4O60224 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC105402.1-201ENST00000413336 545 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 LINC01347-201ENST00000417964 355 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 AC023128.2-201ENST00000420880 1223 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC104333.2-201ENST00000422630 192 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AL354692.1-201ENST00000423044 315 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSX4O60224 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 RPS27P18-201ENST00000431701 247 ntBASIC4.78□□□□□ -1.64
SSX4O60224 CYCSP6-201ENST00000434498 302 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 AC006994.1-201ENST00000438212 839 ntBASIC4.78□□□□□ -1.64
SSX4O60224 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 SBDSP1-204ENST00000453858 737 ntBASIC4.78□□□□□ -1.64
SSX4O60224 RN7SL172P-201ENST00000460535 303 ntBASIC4.78□□□□□ -1.64
SSX4O60224 RPL21P47-201ENST00000483696 477 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 RPEP1-201ENST00000504507 658 ntBASIC4.78□□□□□ -1.64
SSX4O60224 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 RNU5A-7P-201ENST00000515979 116 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 OR5AM1P-201ENST00000532136 1032 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AP000916.1-201ENST00000533869 835 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.78□□□□□ -1.64
SSX4O60224 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.78□□□□□ -1.64
SSX4O60224 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.78□□□□□ -1.64
SSX4O60224 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.78□□□□□ -1.64
SSX4O60224 BNIP3P32-201ENST00000600015 554 ntBASIC4.78□□□□□ -1.64
SSX4O60224 AC018618.2-201ENST00000604770 446 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms