Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC241520.1-201ENST00000422654 1099 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AL160175.1-201ENST00000428124 247 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.14□□□□□ -1.59
LDB2O43679 HMGB3P5-201ENST00000428894 612 ntBASIC5.14□□□□□ -1.59
LDB2O43679 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 AC006994.1-201ENST00000438212 839 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.14□□□□□ -1.59
LDB2O43679 AC069277.2-201ENST00000454211 432 ntBASIC5.14□□□□□ -1.59
LDB2O43679 CYCSP20-201ENST00000473154 315 ntBASIC5.14□□□□□ -1.59
LDB2O43679 RN7SL727P-201ENST00000482164 296 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC091544.1-201ENST00000484702 348 ntBASIC5.14□□□□□ -1.59
LDB2O43679 OR5H3P-201ENST00000502817 919 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.14□□□□□ -1.59
LDB2O43679 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.14□□□□□ -1.59
LDB2O43679 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 AC118942.1-201ENST00000529674 1035 ntBASIC5.14□□□□□ -1.59
LDB2O43679 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
LDB2O43679 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.14□□□□□ -1.59
LDB2O43679 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.14□□□□□ -1.59
LDB2O43679 MIR4509-3-201ENST00000578671 94 ntBASIC5.14□□□□□ -1.59
LDB2O43679 MIR4509-2-201ENST00000583920 94 ntBASIC5.14□□□□□ -1.59
LDB2O43679 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 BMS1P7-201ENST00000602440 1052 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC008536.1-201ENST00000602872 669 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC018695.5-201ENST00000605872 315 ntBASIC5.14□□□□□ -1.59
LDB2O43679 OR8G7P-201ENST00000616658 848 ntBASIC5.14□□□□□ -1.59
LDB2O43679 MIR4509-1-201ENST00000618224 94 ntBASIC5.14□□□□□ -1.59
LDB2O43679 MIR6730-201ENST00000622213 67 ntBASIC5.14□□□□□ -1.59
LDB2O43679 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
LDB2O43679 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LDB2O43679 AC004158.1-201ENST00000564508 4319 ntBASIC5.14□□□□□ -1.59
LDB2O43679 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LDB2O43679 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 AC092111.2-201ENST00000611627 1414 ntBASIC5.14□□□□□ -1.59
LDB2O43679 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.14□□□□□ -1.59
LDB2O43679 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
LDB2O43679 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDB2O43679 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDB2O43679 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 CDC27P2-201ENST00000425026 1922 ntBASIC5.13□□□□□ -1.59
LDB2O43679 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDB2O43679 AC112198.2-201ENST00000426589 6996 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC003985.2-201ENST00000562268 1669 ntBASIC5.13□□□□□ -1.59
LDB2O43679 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 RPL23P2-201ENST00000320371 421 ntBASIC5.13□□□□□ -1.59
LDB2O43679 RNA5SP507-201ENST00000363603 121 ntBASIC5.13□□□□□ -1.59
LDB2O43679 SNORA58B-201ENST00000364259 136 ntBASIC5.13□□□□□ -1.59
LDB2O43679 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 RNU6-468P-201ENST00000384003 109 ntBASIC5.13□□□□□ -1.59
LDB2O43679 PEX12P1-201ENST00000400284 1048 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC096533.1-201ENST00000411645 353 ntBASIC5.13□□□□□ -1.59
LDB2O43679 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 PTP4A1P7-201ENST00000423476 514 ntBASIC5.13□□□□□ -1.59
LDB2O43679 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.13□□□□□ -1.59
LDB2O43679 MTCYBP21-201ENST00000443300 1113 ntBASIC5.13□□□□□ -1.59
LDB2O43679 HMGB1P26-201ENST00000452520 628 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 AL389915.2-201ENST00000454576 441 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC245028.2-201ENST00000458673 253 ntBASIC5.13□□□□□ -1.59
LDB2O43679 RPS17P11-201ENST00000474297 293 ntBASIC5.13□□□□□ -1.59
LDB2O43679 RN7SL222P-201ENST00000476452 299 ntBASIC5.13□□□□□ -1.59
LDB2O43679 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.13□□□□□ -1.59
LDB2O43679 OR11J2P-201ENST00000555298 907 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.13□□□□□ -1.59
LDB2O43679 AC021483.2-201ENST00000567415 758 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.13□□□□□ -1.59
LDB2O43679 AC127024.5-201ENST00000580085 462 ntBASIC5.13□□□□□ -1.59
LDB2O43679 CBX3P2-202ENST00000583365 535 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.13□□□□□ -1.59
LDB2O43679 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.13□□□□□ -1.59
LDB2O43679 AL512427.1-201ENST00000618593 349 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC048344.4-201ENST00000619744 527 ntBASIC5.13□□□□□ -1.59
LDB2O43679 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LDB2O43679 AL356863.1-201ENST00000623378 1080 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC073869.7-201ENST00000640874 297 ntBASIC5.13□□□□□ -1.59
LDB2O43679 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LDB2O43679 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDB2O43679 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LDB2O43679 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.13□□□□□ -1.59
LDB2O43679 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.13□□□□□ -1.59
LDB2O43679 AL359715.4-201ENST00000606629 1436 ntBASIC5.13□□□□□ -1.59
LDB2O43679 AC005005.4-201ENST00000623789 16698 ntBASIC5.13□□□□□ -1.59
LDB2O43679 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
LDB2O43679 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LDB2O43679 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.13□□□□□ -1.59
LDB2O43679 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LDB2O43679 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LDB2O43679 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms