Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.4□□□□□ -1.7
UPK1AO00322 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
UPK1AO00322 MAPK10-286ENST00000641208 8747 ntBASIC4.4□□□□□ -1.7
UPK1AO00322 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.4□□□□□ -1.7
UPK1AO00322 RNA5SP28-201ENST00000363841 119 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 BMS1P3-201ENST00000372011 932 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 AL591848.1-201ENST00000413092 322 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 RPS26P13-201ENST00000419030 330 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.4□□□□□ -1.71
UPK1AO00322 MTND6P5-201ENST00000448266 512 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 RPL7P61-201ENST00000451721 751 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 HIGD1AP8-201ENST00000453927 274 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK1AO00322 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.4□□□□□ -1.71
UPK1AO00322 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 AC091544.1-201ENST00000484702 348 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK1AO00322 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.4□□□□□ -1.71
UPK1AO00322 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK1AO00322 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK1AO00322 NPM1P45-201ENST00000583151 559 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 AC005084.1-201ENST00000605160 304 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 AC015849.6-201ENST00000605454 474 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 AC073137.1-201ENST00000605636 634 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 AL451049.1-201ENST00000608672 497 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
UPK1AO00322 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK1AO00322 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
UPK1AO00322 AC092435.4-201ENST00000623012 4159 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.4□□□□□ -1.71
UPK1AO00322 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
UPK1AO00322 AC091046.3-201ENST00000631455 1574 ntBASIC4.4□□□□□ -1.71
UPK1AO00322 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.4□□□□□ -1.71
UPK1AO00322 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
UPK1AO00322 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 AL136164.3-201ENST00000624429 3978 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AL031119.1-201ENST00000404707 1879 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
UPK1AO00322 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
UPK1AO00322 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 LINC01109-201ENST00000603837 3081 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
UPK1AO00322 RNU1-108P-201ENST00000362556 161 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
UPK1AO00322 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK1AO00322 RN7SKP100-201ENST00000411258 284 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.39□□□□□ -1.71
UPK1AO00322 EIF4EP1-201ENST00000422311 642 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 SETP10-201ENST00000424368 814 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 NPM1P48-201ENST00000436002 853 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 PA2G4P6-201ENST00000438325 1197 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 AL589765.3-201ENST00000446084 462 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 RPS3AP41-201ENST00000462701 778 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 RPL23AP65-201ENST00000475608 468 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 NDUFA5P12-201ENST00000503796 343 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK1AO00322 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK1AO00322 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK1AO00322 AP001922.4-201ENST00000526967 290 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.39□□□□□ -1.71
UPK1AO00322 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.39□□□□□ -1.71
UPK1AO00322 MIR3667-201ENST00000581025 74 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 AC233280.2-201ENST00000603917 1070 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AL008729.2-201ENST00000606393 473 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AC055839.1-201ENST00000634467 498 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 AC138627.1-204ENST00000641894 765 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 AC132825.1-201ENST00000463573 2247 ntBASIC4.39□□□□□ -1.71
UPK1AO00322 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
UPK1AO00322 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.39□□□□□ -1.71
UPK1AO00322 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPK1AO00322 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
UPK1AO00322 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1AO00322 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1AO00322 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms