Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RN7SL518P-201ENST00000491887 280 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 MTCYBP17-201ENST00000503579 789 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 POU5F1P7-201ENST00000508759 541 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC106872.4-201ENST00000510050 523 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AF235103.2-201ENST00000525753 346 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC090751.1-201ENST00000566966 267 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AP003115.1-201ENST00000569849 463 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 NRBF2P1-201ENST00000587407 859 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 FAM27E3-202ENST00000614611 340 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AL161420.1-201ENST00000619393 264 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC018558.4-201ENST00000622153 281 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC087894.3-201ENST00000623682 349 ntBASIC5.8□□□□□ -1.48
SHISA3A0PJX4 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
SHISA3A0PJX4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 RNU6-115P-201ENST00000364310 107 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 LCN1P2-201ENST00000372030 223 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 RNU6-533P-201ENST00000384144 107 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL360271.1-201ENST00000395679 510 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL356057.2-201ENST00000403318 432 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL451061.1-201ENST00000407887 862 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 PPIAP30-201ENST00000415473 519 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL513174.1-201ENST00000423182 629 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC104850.1-201ENST00000435940 476 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 BX679664.2-201ENST00000439282 283 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 RPL23AP28-201ENST00000448062 470 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 TVP23CP1-201ENST00000450317 639 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 GOT2P2-201ENST00000450663 1251 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 RPS26P11-201ENST00000463445 348 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 SLC25A51P1-201ENST00000468432 871 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC087312.1-201ENST00000471411 480 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC091544.1-201ENST00000484702 348 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL591122.1-201ENST00000487348 492 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 EIF3LP3-201ENST00000495197 822 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC114786.4-201ENST00000508771 728 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 CENPUP1-201ENST00000526649 1202 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 CBX3P5-201ENST00000552017 521 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL390334.1-201ENST00000556395 450 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms