Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 CYCSP40-201ENST00000575927 294 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 RNF138P2-201ENST00000603490 592 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC007390.2-201ENST00000606229 3803 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AL589935.2-201ENST00000616471 1231 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 MIR8069-1-201ENST00000616627 86 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 MIR8069-2-201ENST00000621412 86 ntBASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RHBDD3Q9Y3P4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC139713.2-215ENST00000641428 5037 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC008549.2-201ENST00000333482 706 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 MIR223-201ENST00000385204 110 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 QRSL1P2-201ENST00000418582 964 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AL031584.1-201ENST00000447169 754 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AL645937.3-201ENST00000453647 936 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 HMGB1P4-201ENST00000455362 567 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 RNA5SP103-201ENST00000459503 118 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 RPS18P6-201ENST00000476880 458 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC090686.1-201ENST00000481577 749 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC020890.1-201ENST00000491837 504 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC026688.1-201ENST00000520639 1168 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC012339.2-201ENST00000523996 453 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC090022.1-201ENST00000546569 311 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC084757.1-201ENST00000559987 490 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC027281.1-201ENST00000574178 758 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 MIR1269B-201ENST00000580405 75 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC090953.1-201ENST00000604305 1092 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 MIR6729-201ENST00000618194 65 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC004808.2-201ENST00000627965 773 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AL049555.1-201ENST00000562834 1933 ntBASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDD3Q9Y3P4 AC120338.1-201ENST00000625074 1541 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 SALL4P2-201ENST00000423288 2910 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 OR52B1P-201ENST00000316506 909 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 RNU6-171P-201ENST00000384354 107 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 SNORA70.10-201ENST00000384515 134 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 MTCYBP29-201ENST00000436327 1006 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 PA2G4P6-201ENST00000438325 1197 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 KNOP1P3-201ENST00000446933 426 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 RPL31P20-201ENST00000449593 360 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 IGHV5-78-201ENST00000450948 295 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AURKAPS1-201ENST00000451805 1212 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 GYG1P1-201ENST00000460864 698 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC097484.1-201ENST00000471148 389 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 RN7SL222P-201ENST00000476452 299 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC010627.1-201ENST00000503819 1294 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 SNRPCP2-201ENST00000504370 475 ntBASIC4.31□□□□□ -1.72
RHBDD3Q9Y3P4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms