Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL157827.1-201ENST00000447622 132 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL162388.1-201ENST00000450912 352 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC073476.1-201ENST00000452854 407 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL691482.1-201ENST00000453255 87 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 RPS6P4-201ENST00000494693 758 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SL612P-201ENST00000497704 295 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 ACTR6P1-201ENST00000514311 1104 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 RNA5SP228-201ENST00000516232 133 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC011853.1-201ENST00000518911 454 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 MIR4505-201ENST00000582238 73 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AL591926.1-201ENST00000620542 217 ntBASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KCNIP3Q9Y2W7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 RN7SKP104-201ENST00000362605 328 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 RNA5SP335-201ENST00000363817 110 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 RNU1-149P-201ENST00000390870 161 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 LRRC37BP1-201ENST00000398851 714 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AL391422.1-201ENST00000402155 436 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 NUDT19P3-201ENST00000404698 555 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 MIR1182-201ENST00000408363 97 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 RPL26P37-201ENST00000411983 438 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC093655.2-201ENST00000425735 631 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC002504.1-201ENST00000438281 691 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC004938.1-201ENST00000438468 308 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AL353898.1-201ENST00000444055 238 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AL627224.1-201ENST00000448334 444 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 HMGB1P4-201ENST00000455362 567 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC005008.1-201ENST00000456151 612 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC083829.1-201ENST00000503756 657 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 RPS4XP20-201ENST00000505751 772 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 PGBD4P4-201ENST00000509673 613 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 FABP5P6-201ENST00000510588 409 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 OR1F2P-201ENST00000570470 933 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC090312.1-201ENST00000580637 348 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC010245.2-201ENST00000606908 1167 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC135803.1-201ENST00000608748 565 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AC234782.5-201ENST00000617723 324 ntBASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
KCNIP3Q9Y2W7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC008549.2-201ENST00000333482 706 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL603766.1-201ENST00000407763 664 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 VDAC1P9-201ENST00000412766 841 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AL445528.1-201ENST00000426330 420 ntBASIC4.11□□□□□ -1.75
KCNIP3Q9Y2W7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms