Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 MTCO1P12-201ENST00000414273 1543 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 AC025040.2-201ENST00000558657 1852 ntBASIC9.34□□□□□ -0.91
PHF8Q9UPP1 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
PHF8Q9UPP1 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
PHF8Q9UPP1 OR2AH1P-202ENST00000641232 2744 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 RNU6-282P-201ENST00000365357 103 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 RPL7P58-201ENST00000402913 758 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 RNU6-1068P-201ENST00000410958 103 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 RPS27AP17-201ENST00000463344 455 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AL135752.1-201ENST00000479477 471 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC090638.1-201ENST00000498296 909 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AL390198.2-201ENST00000510553 222 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC005741.1-201ENST00000511094 432 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 BTF3P12-201ENST00000519620 469 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC068714.1-201ENST00000559623 800 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC010653.1-201ENST00000571108 881 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC245052.7-201ENST00000601161 359 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 Z84480.1-201ENST00000605131 311 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 MTND4P35-201ENST00000604257 1375 ntBASIC9.33□□□□□ -0.92
PHF8Q9UPP1 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
PHF8Q9UPP1 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC018992.1-201ENST00000523778 2149 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RPS4XP8-201ENST00000402039 771 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 MIR1302-3-201ENST00000408128 138 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 MTATP6P29-201ENST00000415057 132 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 PMS2P9-201ENST00000441237 515 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 MEMO1P4-201ENST00000453590 386 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RN7SL187P-201ENST00000495587 303 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC105417.1-201ENST00000514691 285 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 SNORD60.2-201ENST00000516883 86 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RNA5SP135-201ENST00000517019 125 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RNU6-1271P-201ENST00000517049 105 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 RNU6-1261P-201ENST00000517194 104 ntBASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC9.32□□□□□ -0.92
PHF8Q9UPP1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms