Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 RNU1-82P-201ENST00000390851 165 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 RPS24P12-201ENST00000402084 394 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 VDAC1P9-201ENST00000412766 841 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC009237.10-201ENST00000414112 510 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 RPL21P43-201ENST00000425440 472 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 MTND6P18-201ENST00000439477 513 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 MTND4LP12-201ENST00000448237 295 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 SLC25A18P1-201ENST00000449385 454 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC234781.3-201ENST00000452540 973 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 HIGD1AP14-201ENST00000507617 282 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC091868.1-201ENST00000508746 304 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 RNA5SP446-201ENST00000515955 82 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 MORF4L1P3-201ENST00000525966 950 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC025423.2-201ENST00000537570 439 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC133555.2-201ENST00000550213 292 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC004825.1-201ENST00000555068 586 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC022960.2-201ENST00000616300 666 ntBASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAPAQ9P0L0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 HSPA8P17-201ENST00000427029 1382 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 OR52B1P-201ENST00000316506 909 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RNU6-171P-201ENST00000384354 107 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RNU1-106P-201ENST00000384382 164 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 HMGB3P7-201ENST00000400214 611 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AL391361.1-201ENST00000405580 489 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AC114755.2-201ENST00000413520 361 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AC073136.2-201ENST00000417282 849 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RPL12P43-201ENST00000420608 499 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AL391987.1-201ENST00000441025 200 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AC079168.2-201ENST00000453977 416 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RN7SL30P-201ENST00000488416 306 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RPL37AP8-201ENST00000494116 276 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AK4P6-201ENST00000505168 528 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 IGKV3D-34-201ENST00000522638 302 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 SNORD39.2-201ENST00000579995 76 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RN7SL52P-201ENST00000584271 284 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AC006116.3-201ENST00000592968 361 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 AL135786.2-201ENST00000608422 615 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 VN2R3P-201ENST00000422626 1412 ntBASIC4.43□□□□□ -1.7
VAPAQ9P0L0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VAPAQ9P0L0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 LINC01109-201ENST00000603837 3081 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 HDGFP1-201ENST00000405943 252 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 MTCO1P51-201ENST00000427672 1060 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 RPL21P91-201ENST00000429231 479 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC073587.1-201ENST00000447093 876 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 HSPE1P22-201ENST00000456856 327 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 RN7SL101P-201ENST00000496350 279 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.42□□□□□ -1.7
VAPAQ9P0L0 RNU1-6P-201ENST00000516290 144 ntBASIC4.42□□□□□ -1.7
VAPAQ9P0L0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms