Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC020904.2-202ENST00000614660 1401 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 ASNSP1-204ENST00000641977 1664 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 GAPDHP24-201ENST00000328713 983 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RNA5SP273-201ENST00000362484 113 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 MIR141-201ENST00000384975 95 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RNU6-1055P-201ENST00000391085 107 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RPL32P23-201ENST00000397237 405 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 MTCO2P33-201ENST00000402100 465 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RBMY2KP-201ENST00000418221 992 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL513175.1-201ENST00000431492 780 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 IFNA20P-201ENST00000436840 528 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 RPL12P3-201ENST00000440080 396 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC132479.1-201ENST00000449160 144 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 MEMO1P4-201ENST00000453590 386 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC239798.3-201ENST00000454459 408 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 MTATP8P1-201ENST00000467115 207 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 GAPDHP39-201ENST00000481866 979 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC018645.1-201ENST00000505003 109 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC105417.1-201ENST00000514691 285 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 Y_RNA.718-201ENST00000517110 102 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC011497.2-201ENST00000600255 639 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC104184.1-201ENST00000607513 721 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL080312.2-201ENST00000613001 630 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AC104010.1-201ENST00000616889 150 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 Z69720.2-201ENST00000624755 279 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL25A1Q9BXS0 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC124045.1-201ENST00000606008 1953 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 AC079753.1-201ENST00000623243 3868 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RIOK3P1-201ENST00000418778 1528 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RNU6-171P-201ENST00000384354 107 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 SNORD116-29-201ENST00000384516 83 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RNU6-308P-201ENST00000390957 107 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 MIR548M-201ENST00000408260 86 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 SNORA11C-201ENST00000408532 129 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RN7SKP125-201ENST00000410481 302 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 RNU2-64P-201ENST00000411315 191 ntBASIC6.93□□□□□ -1.3
COL25A1Q9BXS0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms