Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL500527.1-201ENST00000448532 255 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.35□□□□□ -1.55
RAD9AQ99638 RPL23AP56-201ENST00000460778 453 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 RN7SL814P-201ENST00000487715 300 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.35□□□□□ -1.55
RAD9AQ99638 RNU6-319P-201ENST00000516025 108 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.35□□□□□ -1.55
RAD9AQ99638 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.35□□□□□ -1.55
RAD9AQ99638 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.35□□□□□ -1.55
RAD9AQ99638 MIR4660-201ENST00000583549 74 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AL356218.2-201ENST00000605264 187 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AC084036.1-201ENST00000609190 508 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.35□□□□□ -1.55
RAD9AQ99638 AC119674.1-220ENST00000641502 1048 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.35□□□□□ -1.55
RAD9AQ99638 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RAD9AQ99638 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 AC092376.2-201ENST00000622621 4116 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RAD9AQ99638 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC091046.3-201ENST00000631455 1574 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.34□□□□□ -1.55
RAD9AQ99638 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.34□□□□□ -1.55
RAD9AQ99638 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.34□□□□□ -1.55
RAD9AQ99638 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 RNA5SP223-201ENST00000365174 120 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RAD9AQ99638 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RAD9AQ99638 EI24P3-201ENST00000399046 1062 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AL049697.2-201ENST00000403708 294 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.34□□□□□ -1.55
RAD9AQ99638 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.34□□□□□ -1.55
RAD9AQ99638 MTCO1P51-201ENST00000427672 1060 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 RPL23AP1-201ENST00000428990 471 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 RPS29P9-201ENST00000440360 171 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 RPL31P20-201ENST00000449593 360 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 OR52A4P-201ENST00000472867 958 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AC105918.1-201ENST00000474399 838 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 RPS12P31-201ENST00000491419 398 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 RPS27AP18-201ENST00000515536 459 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 RNA5SP230-201ENST00000517039 122 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.34□□□□□ -1.55
RAD9AQ99638 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.34□□□□□ -1.55
RAD9AQ99638 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC011453.2-201ENST00000603737 729 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AL162574.1-201ENST00000615702 950 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AC245389.2-201ENST00000616023 576 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AC104307.1-201ENST00000616142 196 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 AC242843.1-201ENST00000618702 573 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 HPVC1-201ENST00000629899 1198 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RAD9AQ99638 AC097461.1-201ENST00000568928 2821 ntBASIC5.34□□□□□ -1.55
RAD9AQ99638 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.34□□□□□ -1.56
RAD9AQ99638 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RAD9AQ99638 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
RAD9AQ99638 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAD9AQ99638 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.33□□□□□ -1.56
RAD9AQ99638 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.33□□□□□ -1.56
RAD9AQ99638 NCLP2-201ENST00000416078 1462 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
RAD9AQ99638 MFSD8-220ENST00000641243 1422 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RAD9AQ99638 ZNF652P1-201ENST00000442420 1309 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RAD9AQ99638 FAM3C2-201ENST00000312214 681 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 RNU4-39P-201ENST00000362455 127 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 RNA5SP479-201ENST00000364858 117 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 AL589655.1-201ENST00000405398 482 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 RN7SKP27-201ENST00000410684 333 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.33□□□□□ -1.56
RAD9AQ99638 ELOCP19-201ENST00000411919 318 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 AC114755.2-201ENST00000413520 361 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RAD9AQ99638 AC013470.3-201ENST00000420252 1194 ntBASIC5.33□□□□□ -1.56
RAD9AQ99638 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.33□□□□□ -1.56
RAD9AQ99638 NPM1P26-201ENST00000426339 738 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms