Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AC005000.1-201ENST00000536192 288 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AC018630.1-201ENST00000541376 925 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 CR383656.6-201ENST00000550518 394 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 POLR3GP2-201ENST00000588366 668 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AL138895.2-201ENST00000603019 178 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AC124916.2-201ENST00000604416 224 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AC114477.1-201ENST00000605097 605 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AL121890.2-201ENST00000617644 465 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 MIR7854-201ENST00000620068 65 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 DDX43P1-201ENST00000510713 1763 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 AL359715.3-201ENST00000569267 2123 ntBASIC7.81□□□□□ -1.16
TRIM47Q96LD4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM47Q96LD4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 BRD7P1-201ENST00000557705 1915 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AL157777.2-201ENST00000258070 137 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 PPIAP24-201ENST00000328558 471 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 RNA5SP321-201ENST00000362722 111 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 RNU2-62P-201ENST00000410868 191 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 OR52B5P-201ENST00000435337 951 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC092170.1-201ENST00000440211 356 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 PFN1P11-201ENST00000445829 389 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 RPL39P6-201ENST00000448289 150 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 RPL7P31-201ENST00000450192 724 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 MTND1P16-201ENST00000465177 898 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 RPL7P51-201ENST00000490532 749 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC104109.1-201ENST00000498563 436 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 MIR3913-1-201ENST00000577744 102 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC020914.7-201ENST00000594477 545 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC091133.5-201ENST00000603088 301 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AL035410.2-201ENST00000604963 864 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC113139.1-201ENST00000605049 239 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC073137.1-201ENST00000605636 634 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC092807.2-201ENST00000609367 243 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AL589743.6-201ENST00000611025 117 ntBASIC7.8□□□□□ -1.16
TRIM47Q96LD4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM47Q96LD4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC009135.2-201ENST00000624136 1768 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 AC010401.2-201ENST00000575137 4934 ntBASIC7.79□□□□□ -1.16
TRIM47Q96LD4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM47Q96LD4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms