Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RNU6-1263P-201ENST00000384601 106 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 CTSL3P-202ENST00000412179 788 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RPL7P57-201ENST00000423238 740 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 GTF3AP5-201ENST00000442645 697 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC012512.1-201ENST00000446594 718 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RHEBP2-201ENST00000450289 600 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RPS29P22-201ENST00000472363 168 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC073358.1-201ENST00000505671 684 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RNU2-30P-201ENST00000516209 141 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 CDH12P4-201ENST00000517835 295 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 CDH12P3-201ENST00000517935 295 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 CDH12P1-201ENST00000518435 295 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AP001804.2-201ENST00000533932 910 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC084759.1-201ENST00000561168 290 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC122134.1-201ENST00000565664 1104 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 MIR4700-201ENST00000578311 74 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AL161616.1-201ENST00000611867 286 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AL354950.1-201ENST00000614150 568 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC073342.3-201ENST00000624211 193 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 SMG1P4-204ENST00000523028 4131 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AC010928.1-201ENST00000592477 1447 ntBASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ECHDC3Q96DC8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC012618.3-205ENST00000637896 1496 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 RNU1-82P-201ENST00000390851 165 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AL591848.1-201ENST00000413092 322 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 OR51A6P-201ENST00000418680 1004 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC097523.2-201ENST00000435551 652 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 NPM1P33-201ENST00000438918 872 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC079168.2-201ENST00000453977 416 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC090686.1-201ENST00000481577 749 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 NPM1P29-201ENST00000483112 803 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 RPS23P1-201ENST00000491662 432 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 RNA5SP249-201ENST00000516127 99 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AP002981.1-201ENST00000517692 975 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AL008729.2-201ENST00000606393 473 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 RBPJP2-201ENST00000618187 1444 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 MIR7703-201ENST00000620784 77 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AP001005.3-201ENST00000622049 129 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC093775.1-201ENST00000624154 1868 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AL731532.2-201ENST00000623542 1953 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC025574.1-201ENST00000554784 1653 ntBASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ECHDC3Q96DC8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 CASC19-206ENST00000641028 1430 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AL590240.1-201ENST00000334118 313 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 CYB5AP4-201ENST00000396692 399 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 MIR298-201ENST00000401212 88 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 RN7SKP247-201ENST00000411094 308 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 E2F6P2-201ENST00000420708 748 ntBASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.75□□□□□ -1.65
ECHDC3Q96DC8 AC073264.2-201ENST00000448886 166 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms