Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
VPS33AQ96AX1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 RNU6-792P-201ENST00000363490 107 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 RNA5SP234-201ENST00000363916 119 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 MIR142-201ENST00000384835 87 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 U3.32-201ENST00000408116 212 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 TNPO1P1-201ENST00000423641 1138 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC012519.1-201ENST00000424588 610 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AL158073.1-201ENST00000426848 1104 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AL389925.1-201ENST00000432257 728 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC110749.1-201ENST00000462007 357 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC090638.1-201ENST00000498296 909 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC006427.1-201ENST00000514359 712 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 BLZF2P-201ENST00000553776 1130 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 RN7SL435P-201ENST00000584418 282 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC100767.2-201ENST00000604840 693 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC007423.1-201ENST00000605009 627 ntBASIC4.97□□□□□ -1.61
VPS33AQ96AX1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
VPS33AQ96AX1 AC000123.3-201ENST00000624029 4975 ntBASIC4.96□□□□□ -1.61
VPS33AQ96AX1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS33AQ96AX1 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.96□□□□□ -1.61
VPS33AQ96AX1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS33AQ96AX1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VPS33AQ96AX1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 Y_RNA.110-201ENST00000363220 99 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RNU6-609P-201ENST00000365459 107 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RNA5SP122-201ENST00000384457 108 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 MIR105-1-201ENST00000385222 81 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL078599.1-201ENST00000402075 293 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL035079.1-201ENST00000405210 287 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL590290.1-201ENST00000405336 380 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL390316.1-201ENST00000406279 553 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RN7SKP247-201ENST00000411094 308 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 TCEA1P4-201ENST00000415066 844 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RPS3P2-201ENST00000421346 701 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC009965.2-201ENST00000425328 970 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL390119.1-201ENST00000440329 312 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RNFT1P2-201ENST00000443064 757 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RPL7AP61-201ENST00000443410 636 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RPL31P44-201ENST00000447680 377 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 PPIAP21-201ENST00000464473 501 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 CCDC75P1-201ENST00000469247 791 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RN7SL205P-201ENST00000490174 284 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RNU6-467P-201ENST00000517027 110 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 RNA5SP373-201ENST00000517271 95 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC105031.1-201ENST00000518550 476 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 VTA1P2-201ENST00000520205 911 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AP003049.1-201ENST00000529418 457 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AL136520.1-202ENST00000555494 763 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC107958.1-201ENST00000556576 290 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 MIR4271-201ENST00000582451 67 ntBASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS33AQ96AX1 AC092474.3-201ENST00000603022 568 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms