Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
YBX1P67809 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
YBX1P67809 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
YBX1P67809 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
YBX1P67809 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.03□□□□□ -1.44
YBX1P67809 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.03□□□□□ -1.44
YBX1P67809 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
YBX1P67809 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
YBX1P67809 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
YBX1P67809 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.44
YBX1P67809 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 ABCA11P-202ENST00000504019 2110 ntBASIC6.02□□□□□ -1.45
YBX1P67809 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
YBX1P67809 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 VN2R3P-201ENST00000422626 1412 ntBASIC6.02□□□□□ -1.45
YBX1P67809 LCOR-201ENST00000286067 4542 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC092692.1-201ENST00000623625 2595 ntBASIC6.02□□□□□ -1.45
YBX1P67809 TTC41P-205ENST00000551270 3963 ntBASIC6.02□□□□□ -1.45
YBX1P67809 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
YBX1P67809 RNU1-65P-201ENST00000363919 148 ntBASIC6.02□□□□□ -1.45
YBX1P67809 OR1L1-202ENST00000373686 1083 ntBASIC6.02□□□□□ -1.45
YBX1P67809 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 AC010385.1-201ENST00000412374 256 ntBASIC6.02□□□□□ -1.45
YBX1P67809 TPT1P2-201ENST00000413105 503 ntBASIC6.02□□□□□ -1.45
YBX1P67809 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 MTATP6P27-201ENST00000416987 621 ntBASIC6.02□□□□□ -1.45
YBX1P67809 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.02□□□□□ -1.45
YBX1P67809 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 TMX2P1-201ENST00000436507 708 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AL662791.1-201ENST00000441992 928 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC010240.2-201ENST00000445363 1205 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.02□□□□□ -1.45
YBX1P67809 NANOGNBP1-201ENST00000448444 480 ntBASIC6.02□□□□□ -1.45
YBX1P67809 MTND3P10-201ENST00000450967 341 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.02□□□□□ -1.45
YBX1P67809 DDX39BP2-208ENST00000453923 258 ntBASIC6.02□□□□□ -1.45
YBX1P67809 RANP2-201ENST00000456833 229 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.02□□□□□ -1.45
YBX1P67809 RN7SL326P-201ENST00000477493 296 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC113367.2-201ENST00000505749 160 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.02□□□□□ -1.45
YBX1P67809 UGT2A3P7-201ENST00000510485 734 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC079395.1-201ENST00000510981 262 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.02□□□□□ -1.45
YBX1P67809 RNU6-314P-201ENST00000516574 104 ntBASIC6.02□□□□□ -1.45
YBX1P67809 Y_RNA.710-201ENST00000516975 110 ntBASIC6.02□□□□□ -1.45
YBX1P67809 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.02□□□□□ -1.45
YBX1P67809 OR5BC1P-201ENST00000529327 739 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC104383.1-201ENST00000530297 370 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AP001858.2-201ENST00000536213 601 ntBASIC6.02□□□□□ -1.45
YBX1P67809 GLYCAM1-201ENST00000546596 285 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 AC127024.5-201ENST00000580085 462 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC027243.2-201ENST00000602530 724 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC112220.3-201ENST00000605502 502 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC011374.2-201ENST00000607135 526 ntBASIC6.02□□□□□ -1.45
YBX1P67809 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.02□□□□□ -1.45
YBX1P67809 MIR6862-1-201ENST00000613016 70 ntBASIC6.02□□□□□ -1.45
YBX1P67809 MIR6862-2-201ENST00000614755 70 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC087565.3-203ENST00000641018 837 ntBASIC6.02□□□□□ -1.45
YBX1P67809 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
YBX1P67809 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
YBX1P67809 MTND5P17-201ENST00000418405 1603 ntBASIC6.02□□□□□ -1.45
YBX1P67809 AC138393.1-206ENST00000540997 1886 ntBASIC6.02□□□□□ -1.45
YBX1P67809 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
YBX1P67809 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.02□□□□□ -1.45
YBX1P67809 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.02□□□□□ -1.45
YBX1P67809 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
YBX1P67809 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
YBX1P67809 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.02□□□□□ -1.45
YBX1P67809 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
YBX1P67809 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
YBX1P67809 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
YBX1P67809 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
YBX1P67809 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
YBX1P67809 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.01□□□□□ -1.45
YBX1P67809 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
YBX1P67809 AC027575.3-201ENST00000583058 2747 ntBASIC6.01□□□□□ -1.45
YBX1P67809 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
YBX1P67809 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms