Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 AL356489.2-201ENST00000566968 3528 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UBE2D3P61077 RPL23P2-201ENST00000320371 421 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 RN7SKP216-201ENST00000411050 312 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 GJA6P-201ENST00000415117 1042 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE2D3P61077 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 SLC25A18P1-201ENST00000449385 454 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AL451050.1-201ENST00000450126 415 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AC140172.1-201ENST00000502928 141 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AC138409.2-202ENST00000507274 458 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.37□□□□□ -1.87
UBE2D3P61077 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.37□□□□□ -1.87
UBE2D3P61077 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 MIR4310-201ENST00000582950 57 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE2D3P61077 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 AP001521.2-201ENST00000608772 546 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AC009163.6-201ENST00000612367 342 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 AC011815.3-201ENST00000624194 473 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 LINC01739-205ENST00000641890 573 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.37□□□□□ -1.87
UBE2D3P61077 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
UBE2D3P61077 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UBE2D3P61077 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2D3P61077 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.37□□□□□ -1.87
UBE2D3P61077 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2D3P61077 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2D3P61077 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 DDX18P3-201ENST00000404856 2007 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2D3P61077 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBE2D3P61077 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBE2D3P61077 SNORA68.2-201ENST00000391263 128 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 AL080315.1-201ENST00000406055 466 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 SNORA79B-201ENST00000410557 148 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 RNA5SP39-201ENST00000411245 120 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 AC073136.2-201ENST00000417282 849 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 LINC00993-201ENST00000420453 540 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 IPMKP1-201ENST00000425988 855 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 RPL7P11-201ENST00000437586 658 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 MTND6P18-201ENST00000439477 513 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 TDGF1P1-201ENST00000445734 527 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 RPL23AP56-201ENST00000460778 453 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 MRPS33P2-201ENST00000507850 322 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 RN7SKP66-201ENST00000516681 231 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 AC100770.1-201ENST00000532310 322 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 FKBP1BP1-201ENST00000553366 325 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.36□□□□□ -1.87
UBE2D3P61077 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 AC006116.3-201ENST00000592968 361 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 SUMO2P15-201ENST00000604285 278 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 EIF3FP1-201ENST00000613970 806 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 MIR4727-201ENST00000622232 55 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.36□□□□□ -1.87
UBE2D3P61077 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 IQCB2P-201ENST00000401788 1633 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2D3P61077 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2D3P61077 AL136164.3-201ENST00000624429 3978 ntBASIC3.36□□□□□ -1.87
UBE2D3P61077 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.35□□□□□ -1.87
UBE2D3P61077 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
UBE2D3P61077 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2D3P61077 AL590763.1-201ENST00000398297 1545 ntBASIC3.35□□□□□ -1.87
UBE2D3P61077 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2D3P61077 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2D3P61077 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms