Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 SLC25A44-201ENST00000359511 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
NUBP1P53384 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 RNU6-1290P-201ENST00000362957 109 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 RN7SKP250-201ENST00000363924 321 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 RNU6-174P-201ENST00000410406 106 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.28□□□□□ -1.08
NUBP1P53384 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 AC034207.1-201ENST00000506742 948 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 AC117383.2-201ENST00000514722 322 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 MRPS5P3-201ENST00000515577 166 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.28□□□□□ -1.08
NUBP1P53384 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC8.28□□□□□ -1.08
NUBP1P53384 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 AL670379.6-201ENST00000603753 252 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AC006363.1-201ENST00000603806 463 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AL670379.1-201ENST00000604752 252 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AL670379.5-201ENST00000605253 252 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AL670379.8-201ENST00000605353 252 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AL670379.7-201ENST00000605823 252 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.28□□□□□ -1.08
NUBP1P53384 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 AC093799.2-201ENST00000610062 578 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 MIR6889-201ENST00000613185 59 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 GOSR2-215ENST00000638374 2683 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 HSPA8P1-201ENST00000425843 1833 ntBASIC8.28□□□□□ -1.08
NUBP1P53384 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
NUBP1P53384 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.28□□□□□ -1.08
NUBP1P53384 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.28□□□□□ -1.08
NUBP1P53384 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.28□□□□□ -1.08
NUBP1P53384 EIF1AX-202ENST00000379607 4427 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
NUBP1P53384 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
NUBP1P53384 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
NUBP1P53384 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NUBP1P53384 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NUBP1P53384 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.09
NUBP1P53384 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NUBP1P53384 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.27□□□□□ -1.09
NUBP1P53384 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
NUBP1P53384 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 AL023806.3-201ENST00000638502 2704 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
NUBP1P53384 SNX19P1-201ENST00000444901 2981 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
NUBP1P53384 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
NUBP1P53384 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.27□□□□□ -1.09
NUBP1P53384 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.27□□□□□ -1.09
NUBP1P53384 MIR411-201ENST00000362239 96 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 RNU1-76P-201ENST00000362903 159 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 SNORD81.1-201ENST00000363064 77 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 MIR138-2-201ENST00000384916 84 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 HMGB3P7-201ENST00000400214 611 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 AL139100.1-201ENST00000408001 498 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 RN7SKP30-201ENST00000411373 334 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 AC239367.3-201ENST00000428996 814 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 AC005094.1-201ENST00000440420 368 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.27□□□□□ -1.09
NUBP1P53384 RBMY2TP-201ENST00000451162 947 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.27□□□□□ -1.09
NUBP1P53384 AC018437.1-201ENST00000492214 406 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 RPS23P5-201ENST00000495419 428 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 AC009643.1-201ENST00000532030 391 ntBASIC8.27□□□□□ -1.09
NUBP1P53384 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms