Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.75□□□□□ -1.49
NEK3P51956 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.75□□□□□ -1.49
NEK3P51956 OR7E13P-201ENST00000526052 910 ntBASIC5.75□□□□□ -1.49
NEK3P51956 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.75□□□□□ -1.49
NEK3P51956 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.75□□□□□ -1.49
NEK3P51956 AC009948.4-201ENST00000604692 675 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AC027449.1-201ENST00000608890 407 ntBASIC5.75□□□□□ -1.49
NEK3P51956 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 AP000894.4-201ENST00000610185 483 ntBASIC5.75□□□□□ -1.49
NEK3P51956 DUXAP10-204ENST00000612052 616 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AC109309.2-201ENST00000612597 332 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 AC008115.3-201ENST00000614874 549 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AL162574.1-201ENST00000615702 950 ntBASIC5.75□□□□□ -1.49
NEK3P51956 AL121594.5-201ENST00000631724 573 ntBASIC5.75□□□□□ -1.49
NEK3P51956 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
NEK3P51956 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.75□□□□□ -1.49
NEK3P51956 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
NEK3P51956 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 MRRFP1-201ENST00000435941 1675 ntBASIC5.75□□□□□ -1.49
NEK3P51956 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.75□□□□□ -1.49
NEK3P51956 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NEK3P51956 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 SMG1P6-201ENST00000532337 2930 ntBASIC5.75□□□□□ -1.49
NEK3P51956 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NEK3P51956 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEK3P51956 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEK3P51956 AL049737.1-201ENST00000413920 1403 ntBASIC5.74□□□□□ -1.49
NEK3P51956 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEK3P51956 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 BCORP1-203ENST00000513194 5093 ntBASIC5.74□□□□□ -1.49
NEK3P51956 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.74□□□□□ -1.49
NEK3P51956 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
NEK3P51956 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 RNU2-65P-201ENST00000410162 185 ntBASIC5.74□□□□□ -1.49
NEK3P51956 RNU6-77P-201ENST00000410554 91 ntBASIC5.74□□□□□ -1.49
NEK3P51956 GPS2P1-201ENST00000411761 986 ntBASIC5.74□□□□□ -1.49
NEK3P51956 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AC234782.4-201ENST00000417646 1048 ntBASIC5.74□□□□□ -1.49
NEK3P51956 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 FMO7P-201ENST00000436045 768 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AC092809.1-201ENST00000441469 474 ntBASIC5.74□□□□□ -1.49
NEK3P51956 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AL450996.1-201ENST00000445574 1202 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AL606517.1-201ENST00000446914 387 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AL031313.1-201ENST00000448435 256 ntBASIC5.74□□□□□ -1.49
NEK3P51956 RPS23P2-201ENST00000463671 415 ntBASIC5.74□□□□□ -1.49
NEK3P51956 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 NDUFS5P6-201ENST00000529136 295 ntBASIC5.74□□□□□ -1.49
NEK3P51956 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.74□□□□□ -1.49
NEK3P51956 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEK3P51956 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.74□□□□□ -1.49
NEK3P51956 AC115085.1-201ENST00000588924 229 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.74□□□□□ -1.49
NEK3P51956 RPP40P2-201ENST00000603596 712 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AC009027.1-201ENST00000604510 479 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.74□□□□□ -1.49
NEK3P51956 AC100847.1-201ENST00000611316 481 ntBASIC5.74□□□□□ -1.49
NEK3P51956 AC008115.4-201ENST00000619780 775 ntBASIC5.74□□□□□ -1.49
NEK3P51956 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NEK3P51956 BX649567.1-201ENST00000642071 1134 ntBASIC5.74□□□□□ -1.49
NEK3P51956 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NEK3P51956 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NEK3P51956 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.74□□□□□ -1.49
NEK3P51956 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.74□□□□□ -1.49
NEK3P51956 AC114786.1-201ENST00000512892 1415 ntBASIC5.74□□□□□ -1.49
NEK3P51956 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.73□□□□□ -1.49
NEK3P51956 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 ASNSP1-204ENST00000641977 1664 ntBASIC5.73□□□□□ -1.49
NEK3P51956 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
NEK3P51956 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.73□□□□□ -1.49
NEK3P51956 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NEK3P51956 RNA5SP30-201ENST00000365552 115 ntBASIC5.73□□□□□ -1.49
NEK3P51956 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
NEK3P51956 MIR130A-201ENST00000385274 89 ntBASIC5.73□□□□□ -1.49
NEK3P51956 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.73□□□□□ -1.49
NEK3P51956 OR6E1P-201ENST00000414424 923 ntBASIC5.73□□□□□ -1.49
NEK3P51956 AL133482.1-201ENST00000415988 498 ntBASIC5.73□□□□□ -1.49
NEK3P51956 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.73□□□□□ -1.49
NEK3P51956 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.73□□□□□ -1.49
NEK3P51956 RPS26P47-201ENST00000427219 348 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms