Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NPM1P28-201ENST00000492269 840 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCN3P51790 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 AC034244.2-201ENST00000514668 858 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AC112206.4-201ENST00000515142 405 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AC103833.1-201ENST00000517442 172 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCN3P51790 HMGB1P46-201ENST00000520062 610 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AP001880.2-201ENST00000538233 448 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCN3P51790 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCN3P51790 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCN3P51790 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCN3P51790 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.44□□□□□ -1.54
CLCN3P51790 SNORD39.2-201ENST00000579995 76 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.44□□□□□ -1.54
CLCN3P51790 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 MTCO2P22-201ENST00000603246 681 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AL450270.1-201ENST00000606160 391 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 OR8G7P-201ENST00000616658 848 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCN3P51790 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CLCN3P51790 AC091932.2-201ENST00000623014 291 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 AC092159.4-201ENST00000624944 550 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CLCN3P51790 SPATA2P1-201ENST00000431223 2055 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CLCN3P51790 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.44□□□□□ -1.54
CLCN3P51790 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CLCN3P51790 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CLCN3P51790 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLCN3P51790 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCN3P51790 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CLCN3P51790 SNORA5.1-201ENST00000384275 131 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 RN7SKP16-201ENST00000410180 299 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCN3P51790 AL590139.1-201ENST00000416267 400 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AC093084.1-201ENST00000424233 687 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 MTND4LP13-201ENST00000425022 298 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCN3P51790 CEACAMP9-201ENST00000442990 513 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 H2AFZP6-201ENST00000444403 394 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCN3P51790 SLC25A18P1-201ENST00000449385 454 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 PRPF38AP1-201ENST00000451976 933 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCN3P51790 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.43□□□□□ -1.54
CLCN3P51790 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.43□□□□□ -1.54
CLCN3P51790 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.43□□□□□ -1.54
CLCN3P51790 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 AC233266.2-201ENST00000567067 528 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AL512782.1-201ENST00000603093 364 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.43□□□□□ -1.54
CLCN3P51790 AC135178.6-201ENST00000605314 398 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AL391358.1-201ENST00000605342 190 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AC004775.1-201ENST00000607389 753 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 AL049794.2-201ENST00000616301 365 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 AC105105.5-201ENST00000622635 1294 ntBASIC5.43□□□□□ -1.54
CLCN3P51790 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLCN3P51790 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CLCN3P51790 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.43□□□□□ -1.54
CLCN3P51790 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CLCN3P51790 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCN3P51790 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCN3P51790 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCN3P51790 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCN3P51790 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCN3P51790 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCN3P51790 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCN3P51790 AP000568.1-201ENST00000282964 442 ntBASIC5.42□□□□□ -1.54
CLCN3P51790 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLCN3P51790 RNU6-609P-201ENST00000365459 107 ntBASIC5.42□□□□□ -1.54
CLCN3P51790 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCN3P51790 RN7SKP100-201ENST00000411258 284 ntBASIC5.42□□□□□ -1.54
CLCN3P51790 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCN3P51790 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCN3P51790 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms