Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRCA2P51587 AL450992.3-201ENST00000413192 568 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.85□□□□□ -1.63
BRCA2P51587 CAB39P1-201ENST00000502277 460 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 AL592156.1-201ENST00000508758 304 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.85□□□□□ -1.63
BRCA2P51587 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.85□□□□□ -1.63
BRCA2P51587 AC015912.2-201ENST00000571053 181 ntBASIC4.85□□□□□ -1.63
BRCA2P51587 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 AL159987.2-201ENST00000432754 307 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 ATP5G1P3-201ENST00000463301 410 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.84□□□□□ -1.63
BRCA2P51587 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
BRCA2P51587 AC074250.1-201ENST00000511117 192 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 KCTD9P2-201ENST00000512203 1013 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 AC105233.3-201ENST00000531125 744 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.84□□□□□ -1.63
BRCA2P51587 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.84□□□□□ -1.63
BRCA2P51587 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC4.84□□□□□ -1.63
BRCA2P51587 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC4.84□□□□□ -1.63
BRCA2P51587 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 AC026427.2-201ENST00000506228 536 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.84□□□□□ -1.63
BRCA2P51587 MIR7975-201ENST00000619350 68 ntBASIC4.84□□□□□ -1.63
BRCA2P51587 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
BRCA2P51587 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.84□□□□□ -1.63
BRCA2P51587 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRCA2P51587 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
BRCA2P51587 AL031119.1-201ENST00000404707 1879 ntBASIC4.84□□□□□ -1.64
BRCA2P51587 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
BRCA2P51587 AL139095.1-201ENST00000404326 391 ntBASIC4.84□□□□□ -1.64
BRCA2P51587 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.84□□□□□ -1.64
BRCA2P51587 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.84□□□□□ -1.64
BRCA2P51587 MRPL48P1-201ENST00000445390 636 ntBASIC4.84□□□□□ -1.64
BRCA2P51587 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.84□□□□□ -1.64
BRCA2P51587 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.84□□□□□ -1.64
BRCA2P51587 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.64
BRCA2P51587 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.84□□□□□ -1.64
BRCA2P51587 AC008013.2-202ENST00000637965 364 ntBASIC4.84□□□□□ -1.64
BRCA2P51587 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
BRCA2P51587 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
BRCA2P51587 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
BRCA2P51587 MTND6P5-201ENST00000448266 512 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 RPS29P2-201ENST00000479278 136 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 AL358832.1-201ENST00000497800 389 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.83□□□□□ -1.64
BRCA2P51587 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.83□□□□□ -1.64
BRCA2P51587 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 AC024560.2-201ENST00000507981 1497 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 RN7SKP74-201ENST00000362849 309 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 RNA5SP151-201ENST00000365632 117 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.83□□□□□ -1.64
BRCA2P51587 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.83□□□□□ -1.64
BRCA2P51587 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.83□□□□□ -1.64
BRCA2P51587 AC010653.1-201ENST00000571108 881 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 AC079587.1-201ENST00000603846 277 ntBASIC4.83□□□□□ -1.64
BRCA2P51587 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
BRCA2P51587 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
BRCA2P51587 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
BRCA2P51587 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
BRCA2P51587 OR52E6-202ENST00000379946 954 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 AC097486.1-201ENST00000515331 210 ntBASIC4.82□□□□□ -1.64
BRCA2P51587 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCA2P51587 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCA2P51587 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCA2P51587 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCA2P51587 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCA2P51587 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCA2P51587 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCA2P51587 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms