Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 RAD23BP1-201ENST00000421404 1227 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 RPS12P10-201ENST00000427031 377 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL12P48061 RPS29P17-201ENST00000430795 166 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 AC092162.1-201ENST00000432828 434 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 BMS1P19-201ENST00000433925 393 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL12P48061 SERPINA7P1-201ENST00000443077 631 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 AC114755.5-201ENST00000447760 831 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL12P48061 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.73□□□□□ -1.65
CXCL12P48061 AC079168.2-201ENST00000453977 416 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 RN7SL517P-201ENST00000462240 305 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 RPL21P126-201ENST00000470049 478 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 RPSAP51-201ENST00000497462 645 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 PPM1AP1-201ENST00000502740 1135 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL12P48061 RNU6-709P-201ENST00000517257 104 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 IGLVIV-65-201ENST00000517313 360 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL12P48061 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.73□□□□□ -1.65
CXCL12P48061 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL12P48061 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 IPO5P1-202ENST00000600039 287 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CXCL12P48061 AC063976.2-201ENST00000425667 3556 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL12P48061 CASC19-255ENST00000641733 1385 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CXCL12P48061 AC140134.1-201ENST00000511830 3544 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 ZFRP1-201ENST00000457579 2970 ntBASIC4.73□□□□□ -1.65
CXCL12P48061 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
CXCL12P48061 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.73□□□□□ -1.65
CXCL12P48061 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CXCL12P48061 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL12P48061 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CXCL12P48061 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CXCL12P48061 RN7SKP145-201ENST00000363291 303 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 RNU6-673P-201ENST00000365084 104 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL12P48061 AL445189.1-201ENST00000405722 338 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AC011933.1-201ENST00000413334 321 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 RPL7AP25-201ENST00000423357 805 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL12P48061 AC116533.1-201ENST00000459748 321 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AC104763.1-201ENST00000475274 360 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL12P48061 AC090058.1-201ENST00000498788 435 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 ENPP7P11-201ENST00000505915 627 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.72□□□□□ -1.65
CXCL12P48061 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.72□□□□□ -1.65
CXCL12P48061 AC116553.2-201ENST00000564203 463 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL12P48061 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL12P48061 CCDC58P3-201ENST00000590792 430 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AC093388.1-201ENST00000609166 430 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AL162574.1-201ENST00000615702 950 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.72□□□□□ -1.65
CXCL12P48061 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL12P48061 AC034229.5-201ENST00000624258 185 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 AP000843.1-201ENST00000624880 701 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CXCL12P48061 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.72□□□□□ -1.65
CXCL12P48061 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.72□□□□□ -1.65
CXCL12P48061 MTCO1P7-201ENST00000419523 1542 ntBASIC4.72□□□□□ -1.65
CXCL12P48061 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CXCL12P48061 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CXCL12P48061 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CXCL12P48061 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CXCL12P48061 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CXCL12P48061 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 AC006484.1-201ENST00000435086 1884 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.71□□□□□ -1.66
CXCL12P48061 MAPK10-338ENST00000641647 3362 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CXCL12P48061 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CXCL12P48061 AL121657.1-201ENST00000327215 531 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CXCL12P48061 RNU1-94P-201ENST00000362627 173 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CXCL12P48061 RPL23AP59-201ENST00000399415 461 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 RPL21P108-201ENST00000413857 481 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 RPL7P57-201ENST00000423238 740 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 AC021876.1-201ENST00000425959 359 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 AC011998.1-201ENST00000433403 117 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 YWHAZP2-201ENST00000440317 728 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 RN7SL810P-201ENST00000493031 276 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 MRPL49P2-201ENST00000521066 465 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 CYCSP29-201ENST00000533731 318 ntBASIC4.71□□□□□ -1.66
CXCL12P48061 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms