Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN9P43378 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN9P43378 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN9P43378 AC093716.1-201ENST00000435923 377 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN9P43378 CNOT7P2-201ENST00000441051 832 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 MTCYBP21-201ENST00000443300 1113 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN9P43378 AC021660.1-201ENST00000465006 554 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
PTPN9P43378 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN9P43378 AC091544.1-201ENST00000484702 348 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AC005412.2-201ENST00000492004 341 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN9P43378 AC072052.1-201ENST00000496556 306 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN9P43378 TRAV31-201ENST00000502780 342 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AC011411.1-201ENST00000509592 876 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AC110760.3-202ENST00000515177 371 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.37□□□□□ -1.55
PTPN9P43378 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.37□□□□□ -1.55
PTPN9P43378 YWHAZP1-201ENST00000556286 722 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.37□□□□□ -1.55
PTPN9P43378 AC084373.1-201ENST00000603311 235 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 SUMO2P15-201ENST00000604285 278 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 AP002505.2-201ENST00000623585 696 ntBASIC5.37□□□□□ -1.55
PTPN9P43378 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PTPN9P43378 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN9P43378 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN9P43378 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN9P43378 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.37□□□□□ -1.55
PTPN9P43378 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTPN9P43378 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPN9P43378 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PTPN9P43378 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
PTPN9P43378 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPN9P43378 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPN9P43378 AC104260.2-201ENST00000623551 3497 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 SNORA51.1-201ENST00000363243 140 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 RNU6-354P-201ENST00000383862 107 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 RNU6-610P-201ENST00000384264 107 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 RNU6-729P-201ENST00000384399 107 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTPN9P43378 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTPN9P43378 HSPE1P16-201ENST00000426640 348 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.36□□□□□ -1.55
PTPN9P43378 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPN9P43378 AC011242.1-201ENST00000433596 1158 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC044797.1-201ENST00000445744 679 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 RN7SL222P-201ENST00000476452 299 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC079841.1-201ENST00000481228 950 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 RPL21P47-201ENST00000483696 477 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC108729.1-201ENST00000487812 947 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 RN7SL30P-201ENST00000488416 306 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 MYL12BP2-201ENST00000503948 512 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 AC010476.1-201ENST00000519111 851 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC104115.2-201ENST00000523026 687 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 AC090022.1-201ENST00000546569 311 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC004825.1-201ENST00000555068 586 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AL390334.1-201ENST00000556395 450 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC106734.1-201ENST00000568646 663 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPN9P43378 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.36□□□□□ -1.55
PTPN9P43378 SUMO2P14-201ENST00000604488 293 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.36□□□□□ -1.55
PTPN9P43378 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.36□□□□□ -1.55
PTPN9P43378 AC099654.9-201ENST00000637055 678 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 AL645568.2-201ENST00000432815 1337 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.36□□□□□ -1.55
PTPN9P43378 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTPN9P43378 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.36□□□□□ -1.55
PTPN9P43378 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
PTPN9P43378 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.36□□□□□ -1.55
PTPN9P43378 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTPN9P43378 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPN9P43378 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
PTPN9P43378 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPN9P43378 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPN9P43378 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.35□□□□□ -1.55
PTPN9P43378 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PTPN9P43378 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.35□□□□□ -1.55
PTPN9P43378 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTPN9P43378 ZNF733P-202ENST00000444809 1573 ntBASIC5.35□□□□□ -1.55
PTPN9P43378 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.35□□□□□ -1.55
PTPN9P43378 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PTPN9P43378 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PTPN9P43378 RN7SKP113-201ENST00000363891 295 ntBASIC5.35□□□□□ -1.55
PTPN9P43378 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms