Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LTBRP36941 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LTBRP36941 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.12□□□□□ -1.43
LTBRP36941 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LTBRP36941 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.12□□□□□ -1.43
LTBRP36941 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
LTBRP36941 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LTBRP36941 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LTBRP36941 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 Y_RNA.3-201ENST00000362331 103 ntBASIC6.12□□□□□ -1.43
LTBRP36941 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.12□□□□□ -1.43
LTBRP36941 RN7SKP213-201ENST00000410746 298 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.12□□□□□ -1.43
LTBRP36941 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.12□□□□□ -1.43
LTBRP36941 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 MTCYBP5-201ENST00000423752 1135 ntBASIC6.12□□□□□ -1.43
LTBRP36941 MED14P1-201ENST00000430517 648 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 VN1R54P-201ENST00000435210 1049 ntBASIC6.12□□□□□ -1.43
LTBRP36941 RPS12P17-201ENST00000438591 377 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 RPS27AP3-201ENST00000453803 454 ntBASIC6.12□□□□□ -1.43
LTBRP36941 RFC5P1-201ENST00000454419 874 ntBASIC6.12□□□□□ -1.43
LTBRP36941 MTND1P16-201ENST00000465177 898 ntBASIC6.12□□□□□ -1.43
LTBRP36941 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.12□□□□□ -1.43
LTBRP36941 DYNLL1P6-201ENST00000503440 264 ntBASIC6.12□□□□□ -1.43
LTBRP36941 RNA5SP228-201ENST00000516232 133 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AC087808.1-201ENST00000520501 361 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 PCNPP1-201ENST00000552501 511 ntBASIC6.12□□□□□ -1.43
LTBRP36941 DCAF13P3-201ENST00000561147 1334 ntBASIC6.12□□□□□ -1.43
LTBRP36941 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.12□□□□□ -1.43
LTBRP36941 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.12□□□□□ -1.43
LTBRP36941 ELOCP28-201ENST00000590044 317 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 AC128687.1-201ENST00000605304 619 ntBASIC6.12□□□□□ -1.43
LTBRP36941 MIR6820-201ENST00000611508 62 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AL049539.1-201ENST00000611964 459 ntBASIC6.12□□□□□ -1.43
LTBRP36941 AL136981.2-201ENST00000617319 734 ntBASIC6.12□□□□□ -1.43
LTBRP36941 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
LTBRP36941 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LTBRP36941 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.12□□□□□ -1.43
LTBRP36941 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LTBRP36941 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.11□□□□□ -1.43
LTBRP36941 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
LTBRP36941 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
LTBRP36941 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.11□□□□□ -1.43
LTBRP36941 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 AC109315.1-201ENST00000584143 1347 ntBASIC6.11□□□□□ -1.43
LTBRP36941 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 HMGB1P5-201ENST00000255320 642 ntBASIC6.11□□□□□ -1.43
LTBRP36941 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LTBRP36941 SNORA11C-201ENST00000408532 129 ntBASIC6.11□□□□□ -1.43
LTBRP36941 RNU2-16P-201ENST00000410712 136 ntBASIC6.11□□□□□ -1.43
LTBRP36941 RPL7P8-201ENST00000411964 730 ntBASIC6.11□□□□□ -1.43
LTBRP36941 TPT1P2-201ENST00000413105 503 ntBASIC6.11□□□□□ -1.43
LTBRP36941 AC019050.1-201ENST00000418508 492 ntBASIC6.11□□□□□ -1.43
LTBRP36941 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.11□□□□□ -1.43
LTBRP36941 AL133173.1-201ENST00000423458 397 ntBASIC6.11□□□□□ -1.43
LTBRP36941 AC099677.3-201ENST00000427081 395 ntBASIC6.11□□□□□ -1.43
LTBRP36941 AP001324.1-201ENST00000428553 399 ntBASIC6.11□□□□□ -1.43
LTBRP36941 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.11□□□□□ -1.43
LTBRP36941 MTND1P4-201ENST00000435196 415 ntBASIC6.11□□□□□ -1.43
LTBRP36941 OR52B5P-201ENST00000435337 951 ntBASIC6.11□□□□□ -1.43
LTBRP36941 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 OR52E3P-201ENST00000452083 936 ntBASIC6.11□□□□□ -1.43
LTBRP36941 SDC4P-201ENST00000453285 601 ntBASIC6.11□□□□□ -1.43
LTBRP36941 RPL7P48-201ENST00000461513 746 ntBASIC6.11□□□□□ -1.43
LTBRP36941 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.11□□□□□ -1.43
LTBRP36941 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.11□□□□□ -1.43
LTBRP36941 SMARCE1P4-201ENST00000523647 241 ntBASIC6.11□□□□□ -1.43
LTBRP36941 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms