Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC7.27□□□□□ -1.24
CLIP1P30622 FTO-223ENST00000640179 210 ntTSL 5 BASIC7.27□□□□□ -1.24
CLIP1P30622 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.27□□□□□ -1.25
CLIP1P30622 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.27□□□□□ -1.25
CLIP1P30622 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.27□□□□□ -1.25
CLIP1P30622 FAP-203ENST00000443424 2598 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP1P30622 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC7.27□□□□□ -1.25
CLIP1P30622 AL136164.3-201ENST00000624429 3978 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 OR51H2P-202ENST00000641424 3046 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 UGT2B26P-201ENST00000508672 1613 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 OR6C69P-201ENST00000394268 893 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 AL080315.1-201ENST00000406055 466 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 NDUFA5P1-201ENST00000433858 341 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.27□□□□□ -1.25
CLIP1P30622 AC010618.1-201ENST00000469924 477 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 OR11I1P-201ENST00000486033 954 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 PPP1R11P1-201ENST00000486095 376 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.27□□□□□ -1.25
CLIP1P30622 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 AC090948.1-201ENST00000607464 549 ntBASIC7.27□□□□□ -1.25
CLIP1P30622 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CLIP1P30622 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP1P30622 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP1P30622 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.26□□□□□ -1.25
CLIP1P30622 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP1P30622 MFSD8-220ENST00000641243 1422 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP1P30622 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP1P30622 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP1P30622 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CLIP1P30622 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP1P30622 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP1P30622 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP1P30622 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP1P30622 RNA5SP303-201ENST00000516192 130 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 AC134698.5-201ENST00000519444 336 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.26□□□□□ -1.25
CLIP1P30622 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.26□□□□□ -1.25
CLIP1P30622 AL020997.2-201ENST00000602607 184 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 MIR6891-201ENST00000618788 93 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 AL035461.2-201ENST00000619201 524 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 OR2L1P-202ENST00000641567 1023 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 AP000432.2-201ENST00000624164 2048 ntBASIC7.26□□□□□ -1.25
CLIP1P30622 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CLIP1P30622 NOL8P1-201ENST00000508336 3529 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CLIP1P30622 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
CLIP1P30622 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
CLIP1P30622 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CLIP1P30622 SNORA57.1-201ENST00000391227 145 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 AL592291.1-201ENST00000403830 352 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.25□□□□□ -1.25
CLIP1P30622 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.25□□□□□ -1.25
CLIP1P30622 TMSB10P2-201ENST00000416049 131 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.25□□□□□ -1.25
CLIP1P30622 RAD23BP1-201ENST00000421404 1227 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 AL356387.2-201ENST00000422272 243 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 OR2AH1P-201ENST00000425717 928 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.25□□□□□ -1.25
CLIP1P30622 IGLVIV-65-201ENST00000517313 360 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 AP000827.1-201ENST00000527814 258 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC7.25□□□□□ -1.25
CLIP1P30622 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC7.25□□□□□ -1.25
CLIP1P30622 BNIP3P5-201ENST00000562290 498 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 MIR3939-201ENST00000582614 106 ntBASIC7.25□□□□□ -1.25
CLIP1P30622 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CLIP1P30622 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC7.25□□□□□ -1.25
CLIP1P30622 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CLIP1P30622 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC7.25□□□□□ -1.25
CLIP1P30622 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CLIP1P30622 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CLIP1P30622 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CLIP1P30622 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC7.24□□□□□ -1.25
CLIP1P30622 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CLIP1P30622 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC7.24□□□□□ -1.25
CLIP1P30622 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC7.24□□□□□ -1.25
CLIP1P30622 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CLIP1P30622 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.24□□□□□ -1.25
CLIP1P30622 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CLIP1P30622 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC7.24□□□□□ -1.25
CLIP1P30622 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC7.24□□□□□ -1.25
CLIP1P30622 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CLIP1P30622 RNU1-83P-201ENST00000363426 164 ntBASIC7.24□□□□□ -1.25
CLIP1P30622 RNA5SP515-201ENST00000364570 118 ntBASIC7.24□□□□□ -1.25
CLIP1P30622 RPL21P108-201ENST00000413857 481 ntBASIC7.24□□□□□ -1.25
CLIP1P30622 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms