Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RXRBP28702 AC092724.1-201ENST00000624623 3397 ntBASIC7.45□□□□□ -1.22
RXRBP28702 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.45□□□□□ -1.22
RXRBP28702 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.44□□□□□ -1.22
RXRBP28702 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RXRBP28702 Y_RNA.6-201ENST00000362350 114 ntBASIC7.44□□□□□ -1.22
RXRBP28702 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 RN7SKP126-201ENST00000411143 300 ntBASIC7.44□□□□□ -1.22
RXRBP28702 GLUD1P9-201ENST00000420997 1173 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.44□□□□□ -1.22
RXRBP28702 CNOT7P1-201ENST00000429006 852 ntBASIC7.44□□□□□ -1.22
RXRBP28702 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC7.44□□□□□ -1.22
RXRBP28702 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 NANOGP2-201ENST00000435391 727 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AL357520.1-201ENST00000441557 453 ntBASIC7.44□□□□□ -1.22
RXRBP28702 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 TDGF1P1-201ENST00000445734 527 ntBASIC7.44□□□□□ -1.22
RXRBP28702 UBE2V1P7-201ENST00000446395 340 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC073264.2-201ENST00000448886 166 ntBASIC7.44□□□□□ -1.22
RXRBP28702 CYCSP42-201ENST00000450823 238 ntBASIC7.44□□□□□ -1.22
RXRBP28702 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.44□□□□□ -1.22
RXRBP28702 RPL10P17-201ENST00000453852 316 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 HMGB1P47-201ENST00000511281 589 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC7.44□□□□□ -1.22
RXRBP28702 AP000916.1-201ENST00000533869 835 ntBASIC7.44□□□□□ -1.22
RXRBP28702 OR4A6P-201ENST00000534364 970 ntBASIC7.44□□□□□ -1.22
RXRBP28702 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
RXRBP28702 AC092851.1-201ENST00000535964 478 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC027667.1-201ENST00000545814 304 ntBASIC7.44□□□□□ -1.22
RXRBP28702 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 AC104229.1-201ENST00000561364 255 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.44□□□□□ -1.22
RXRBP28702 AC087481.2-201ENST00000565492 330 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AL512347.1-201ENST00000566420 503 ntBASIC7.44□□□□□ -1.22
RXRBP28702 MTND4LP24-201ENST00000572277 291 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC022069.1-201ENST00000582910 658 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.44□□□□□ -1.22
RXRBP28702 AL163642.2-201ENST00000604722 1019 ntBASIC7.44□□□□□ -1.22
RXRBP28702 MIR92B-201ENST00000607575 96 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC092653.1-201ENST00000608509 531 ntBASIC7.44□□□□□ -1.22
RXRBP28702 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.44□□□□□ -1.22
RXRBP28702 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.44□□□□□ -1.22
RXRBP28702 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RXRBP28702 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.43□□□□□ -1.22
RXRBP28702 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RXRBP28702 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RXRBP28702 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.43□□□□□ -1.22
RXRBP28702 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.43□□□□□ -1.22
RXRBP28702 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.43□□□□□ -1.22
RXRBP28702 AC132825.1-201ENST00000463573 2247 ntBASIC7.43□□□□□ -1.22
RXRBP28702 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RXRBP28702 AL137918.1-201ENST00000624542 1922 ntBASIC7.43□□□□□ -1.22
RXRBP28702 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RXRBP28702 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.43□□□□□ -1.22
RXRBP28702 RNU1-85P-201ENST00000364127 164 ntBASIC7.43□□□□□ -1.22
RXRBP28702 MIR551A-201ENST00000385042 96 ntBASIC7.43□□□□□ -1.22
RXRBP28702 RSL24D1P4-201ENST00000400938 484 ntBASIC7.43□□□□□ -1.22
RXRBP28702 OR8G2P-201ENST00000412796 908 ntBASIC7.43□□□□□ -1.22
RXRBP28702 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.43□□□□□ -1.22
RXRBP28702 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.43□□□□□ -1.22
RXRBP28702 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.43□□□□□ -1.22
RXRBP28702 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.43□□□□□ -1.22
RXRBP28702 LDHAP2-201ENST00000437325 985 ntBASIC7.43□□□□□ -1.22
RXRBP28702 EEF1A1P39-201ENST00000440791 250 ntBASIC7.43□□□□□ -1.22
RXRBP28702 CDC27P1-201ENST00000445384 715 ntBASIC7.43□□□□□ -1.22
RXRBP28702 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.43□□□□□ -1.22
RXRBP28702 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.43□□□□□ -1.22
RXRBP28702 AC027673.1-201ENST00000456245 405 ntBASIC7.43□□□□□ -1.22
RXRBP28702 BZW1P2-201ENST00000473537 826 ntBASIC7.43□□□□□ -1.22
RXRBP28702 AC011825.1-201ENST00000484967 388 ntBASIC7.43□□□□□ -1.22
RXRBP28702 RPL21P129-201ENST00000491732 478 ntBASIC7.43□□□□□ -1.22
RXRBP28702 FABP5P6-201ENST00000510588 409 ntBASIC7.43□□□□□ -1.22
RXRBP28702 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.43□□□□□ -1.22
RXRBP28702 HMGB1P46-201ENST00000520062 610 ntBASIC7.43□□□□□ -1.22
RXRBP28702 TPM3P3-201ENST00000521343 354 ntBASIC7.43□□□□□ -1.22
RXRBP28702 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.43□□□□□ -1.22
RXRBP28702 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RXRBP28702 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC7.43□□□□□ -1.22
RXRBP28702 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RXRBP28702 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.43□□□□□ -1.22
RXRBP28702 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.43□□□□□ -1.22
RXRBP28702 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.43□□□□□ -1.22
RXRBP28702 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC7.43□□□□□ -1.22
RXRBP28702 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms