Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP002967.1-201ENST00000624203 539 ntBASIC5.21□□□□□ -1.58
TPM1P09493 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 SNORA17.5-201ENST00000630429 132 ntBASIC5.21□□□□□ -1.58
TPM1P09493 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TPM1P09493 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TPM1P09493 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 AC015813.6-201ENST00000624409 5808 ntBASIC5.21□□□□□ -1.58
TPM1P09493 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM1P09493 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.21□□□□□ -1.58
TPM1P09493 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TPM1P09493 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TPM1P09493 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM1P09493 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.21□□□□□ -1.58
TPM1P09493 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TPM1P09493 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 SNURFL-201ENST00000309296 343 ntBASIC5.2□□□□□ -1.58
TPM1P09493 OR56B2P-201ENST00000317102 954 ntBASIC5.2□□□□□ -1.58
TPM1P09493 RN7SKP115-201ENST00000363177 317 ntBASIC5.2□□□□□ -1.58
TPM1P09493 SNORA70-201ENST00000384436 135 ntBASIC5.2□□□□□ -1.58
TPM1P09493 OR3A2-201ENST00000408891 1076 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 RAB9AP5-201ENST00000437794 597 ntBASIC5.2□□□□□ -1.58
TPM1P09493 MTND6P18-201ENST00000439477 513 ntBASIC5.2□□□□□ -1.58
TPM1P09493 RPL34P20-201ENST00000442771 351 ntBASIC5.2□□□□□ -1.58
TPM1P09493 RAB9AP2-201ENST00000443911 597 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM1P09493 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM1P09493 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 PSMC1P13-201ENST00000458195 985 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC023141.9-201ENST00000458734 412 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC010469.1-201ENST00000463864 576 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC006967.1-201ENST00000467608 589 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC012158.1-204ENST00000483430 465 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC111000.5-201ENST00000506559 1178 ntBASIC5.2□□□□□ -1.58
TPM1P09493 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM1P09493 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.2□□□□□ -1.58
TPM1P09493 FKBP1BP1-201ENST00000553366 325 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.2□□□□□ -1.58
TPM1P09493 AL121834.1-201ENST00000572284 509 ntBASIC5.2□□□□□ -1.58
TPM1P09493 SNORD95-201ENST00000579879 68 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC011447.4-201ENST00000587562 111 ntBASIC5.2□□□□□ -1.58
TPM1P09493 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 AC087468.1-201ENST00000604365 630 ntBASIC5.2□□□□□ -1.58
TPM1P09493 AC015813.4-201ENST00000610469 179 ntBASIC5.2□□□□□ -1.58
TPM1P09493 MIR6778-201ENST00000617912 73 ntBASIC5.2□□□□□ -1.58
TPM1P09493 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 MIR1910-201ENST00000636955 80 ntBASIC5.2□□□□□ -1.58
TPM1P09493 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TPM1P09493 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TPM1P09493 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TPM1P09493 HSPD1P14-201ENST00000432666 1618 ntBASIC5.19□□□□□ -1.58
TPM1P09493 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TPM1P09493 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TPM1P09493 MIR323A-201ENST00000362199 86 ntBASIC5.19□□□□□ -1.58
TPM1P09493 RNA5SP455-201ENST00000365190 119 ntBASIC5.19□□□□□ -1.58
TPM1P09493 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
TPM1P09493 RN7SKP216-201ENST00000411050 312 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.19□□□□□ -1.58
TPM1P09493 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.19□□□□□ -1.58
TPM1P09493 OR52B5P-201ENST00000435337 951 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AP000936.3-201ENST00000438127 255 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.19□□□□□ -1.58
TPM1P09493 PTMAP3-201ENST00000447474 330 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AL389915.2-201ENST00000454576 441 ntBASIC5.19□□□□□ -1.58
TPM1P09493 FGF7P3-201ENST00000454645 303 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AL133244.1-201ENST00000456007 258 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.19□□□□□ -1.58
TPM1P09493 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.19□□□□□ -1.58
TPM1P09493 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.19□□□□□ -1.58
TPM1P09493 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.19□□□□□ -1.58
TPM1P09493 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.19□□□□□ -1.58
TPM1P09493 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
TPM1P09493 AC131238.1-201ENST00000617135 328 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AL022401.1-201ENST00000619498 108 ntBASIC5.19□□□□□ -1.58
TPM1P09493 AC008115.4-201ENST00000619780 775 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms